DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Siah3

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001121565.1 Gene:Siah3 / 380918 MGIID:2685758 Length:268 Species:Mus musculus


Alignment Length:86 Identity:17/86 - (19%)
Similarity:34/86 - (39%) Gaps:29/86 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 SSVRLLRIPRAAPAMENYGFQLTRS----KWDPYPWVCEVAAGTPAALCG-----LKPGDCVL-- 75
            :::.|:..|..|... .|..:|.|:    ||:          .||.::..     :..|||::  
Mouse   183 ATMMLIGTPTQADCF-TYRLELNRNHRRLKWE----------ATPRSVLECVDSVITDGDCLVLN 236

  Fly    76 -------EVNGNDVLGLRVSE 89
                   ..||:..:|:.::|
Mouse   237 TSLAQLFSDNGSLAIGIAITE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 17/84 (20%)
Siah3NP_001121565.1 Sina 131..256 CDD:239753 16/83 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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