DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and pdzk1

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001122142.2 Gene:pdzk1 / 337325 ZFINID:ZDB-GENE-031222-1 Length:553 Species:Danio rerio


Alignment Length:90 Identity:28/90 - (31%)
Similarity:45/90 - (50%) Gaps:12/90 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PRAAPAM---ENYGFQLTRSKWDPY---PWVCEVAAGTPAALCGLKPGDCVLEVNGNDVLGLRVS 88
            ||.|..:   :.|||.|   |.||.   ..:.|:..|:||...|:|..|.:..|||.|:...:..
Zfish   233 PRIADMIKRADGYGFML---KEDPKRKGHCIGEIDKGSPAERAGMKDMDRLAAVNGEDIENCKHE 294

  Fly    89 EIA-KMVKSQKDCVTILCWNSECDK 112
            ::. |:.:..|.|:.:|  ::|.||
Zfish   295 QVVEKICQGNKCCLLVL--DAETDK 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 24/80 (30%)
pdzk1NP_001122142.2 PDZ_signaling 6..86 CDD:238492
PDZ_signaling 126..204 CDD:238492
PDZ 232..311 CDD:214570 24/80 (30%)
PDZ_signaling 392..471 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14191
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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