DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and gopc

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_956851.1 Gene:gopc / 326887 ZFINID:ZDB-GENE-030131-5086 Length:455 Species:Danio rerio


Alignment Length:174 Identity:45/174 - (25%)
Similarity:63/174 - (36%) Gaps:36/174 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ENYGFQLTRSKWDPYP-WVCEVAAGTPAALC-GLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQKD 99
            |..|..:|..|....| .:.|:....||..| ||..||.:|.||.   :.||.::       .|:
Zfish   296 EGLGISITGGKEHGVPILISEIHPTQPAERCGGLHVGDAILAVNN---INLRDAK-------HKE 350

  Fly   100 CVTILCWNSECDKDCDTNSICCAP-----------MPTSLRRLSLVLESILRLVECPVCGVTISP 153
            .||||   |:...:.:...:..||           ...|..|..|.|:.:...........|..|
Zfish   351 AVTIL---SQQRGEIEFEVVYVAPEVDSDDENVEYEDDSGHRYRLYLDELEEASAANHNNGTADP 412

  Fly   154 PAMQCQNGHLLCVDCRIR------SERCPVCRDFYTPRRALLAE 191
            .::|....||  |:.|..      |..||  .|..|.:.|..||
Zfish   413 ASLQAVGKHL--VNNRTENGDVGLSSECP--SDDKTSKTAESAE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 21/68 (31%)
gopcNP_956851.1 PDZ_signaling 285..367 CDD:238492 24/83 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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