DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and PsGEF

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_996333.4 Gene:PsGEF / 31224 FlyBaseID:FBgn0264598 Length:2777 Species:Drosophila melanogaster


Alignment Length:477 Identity:93/477 - (19%)
Similarity:157/477 - (32%) Gaps:141/477 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SAGGFHSTSNEDGQHGDGSSVR----------LLRIPRAAPAMENYGFQLTRSKWDPYPWVCEVA 58
            |.|...||....|....|.:||          ..|:.|...  ..:||.:.   |...|.|.::.
  Fly   610 SGGRRQSTMPNSGGSSVGGAVRQQQGRTPFTMTKRLTRTEE--RGFGFSIV---WTHPPRVEKIE 669

  Fly    59 AGTPAALCGLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQKDCVTILCWNSE-------CDKDCDT 116
            ||..|..||:.|||.|:.|:.::|:.:..:::..:::||...:|:..:...       ...|...
  Fly   670 AGLSADRCGILPGDYVIFVDKHNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLGQ 734

  Fly   117 NSICCA--------------PMPTSLRRLSLVLESILRLVEC---PVCGVTISPPAMQCQNGHLL 164
            |::..:              .:.|:....:.|: |:.|....   |:.. ::|.||..| :|...
  Fly   735 NNVHISTRLGAAVGLGSEEHTLATTATGTTTVM-SLQRTTSTRIQPLAN-SMSRPATAC-SGTTS 796

  Fly   165 CVDC---RIRSERCPVCRDFYTP-----RRALLAEQIFLTIANAFEMCRSENKLRQKLFAGITR- 220
            .::.   |:...:....::...|     ||.||            ::...|......|..|:.| 
  Fly   797 SIEAAKRRLHLPQVTFSKESIVPVTDNRRRFLL------------QLISREQNFTAALHFGVDRF 849

  Fly   221 --PVVGRQDRITGQDTWRKRRPVLPTNKFLTKLLEG-----CAYSTDNLSP--SNAATLLRTNTT 276
              |:..|:|.|:..|    .|.:......|.::.|.     |:....:..|  :.|:.:..:.||
  Fly   850 VQPLGERKDLISPND----HRTLFQNIDELLRIAEDILEQLCSSDQQDQEPQMNFASRVYLSKTT 910

  Fly   277 DVAG-----------------------DSSEIPARTSPVTATPPERTTM----HATLD------- 307
            .:..                       .|..|...|.|  |.|.:|..:    |..|.       
  Fly   911 AICAAYKKYCNGIKRADCVLVNKSRQTGSEFIAFITEP--AVPRKRPDLTMFIHRPLQHFREILK 973

  Fly   308 -----ANAAHPSLSTNDLQQEGVKPNAEGVDEESGTNSSHISATSLHGPPLPASVSPGINESSGL 367
                 |...|                   ||.|...|.|.: ...|.......:||.|:.|..| 
  Fly   974 LMQLLAGNCH-------------------VDTEEHKNFSTV-INELQAAYREITVSSGLMEPLG- 1017

  Fly   368 QPVRIPPVTPSQDLPQQVVQTK 389
               ...|:...|||..::|.||
  Fly  1018 ---EGRPLLTLQDLESRMVFTK 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 23/89 (26%)
PsGEFNP_996333.4 DUF4799 <102..209 CDD:292674
C2 286..>381 CDD:278593
PDZ_signaling 644..716 CDD:238492 21/76 (28%)
RhoGEF 831..1000 CDD:295373 33/194 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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