DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and WHRN

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_011516787.1 Gene:WHRN / 25861 HGNCID:16361 Length:918 Species:Homo sapiens


Alignment Length:474 Identity:93/474 - (19%)
Similarity:152/474 - (32%) Gaps:148/474 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRKSAGGFHSTSN--EDGQH-------GDGSSVRLLRIPRAAPAMENYGFQLTRSKWDPYPWVCE 56
            :|:..|...||.:  :.|..       |||.|:. |.|...|    .||..:..:..||      
Human   258 LRQQEGDRRSTLHLLQGGDEKKVNLVLGDGRSLG-LTIRGGA----EYGLGIYITGVDP------ 311

  Fly    57 VAAGTPAALCGLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQKDCVTILCWNSECDKDCDTNSICC 121
               |:.|...|||.||.:|||||...|.:...|..:::||.:..:..:       ||       .
Human   312 ---GSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTV-------KD-------V 359

  Fly   122 APMP---TSLRRLSLVLESILRLVECPVCG-----------------------VTISPPAMQC-- 158
            ..:|   |::.....:..|.:|.......|                       ||:|....|.  
Human   360 GRLPHARTTVDETKWIASSRIRETMANSAGFLGDLTTEGINKPGFYKGPAGSQVTLSSLGNQTRV 424

  Fly   159 ----QNGHLLCVDCRIRSERCPVCRDFYTPRRALLAEQIFLTIANAFEMCRSENK--LRQKLFAG 217
                |..|||       :|:......:|.......:..:...:...|::..:..|  |..::...
Human   425 LLEEQARHLL-------NEQEHATMAYYLDEYRGGSVSVEALVMALFKLLNTHAKFSLLSEVRGT 482

  Fly   218 ITRPVVGRQDRITGQ---DTWRKRRPVLPTNKFLTKLLEGCAYSTDNLSPSNAAT---------- 269
            |:...:.|.|.:..:   ::.:.|:|..|.        .|..||..:.|.:.::|          
Human   483 ISPQDLERFDHLVLRREIESMKARQPPGPG--------AGDTYSMVSYSDTGSSTGSHGTSTTVS 539

  Fly   270 ----------LLRTNTTD-------VAGDSSEIP--------------ARTSPVTATPPERTTMH 303
                      .|..||.|       |.|:.:.:|              :...|:...||    :.
Human   540 SARERLLWLIDLMENTLDLEETGEAVQGNINALPDVSVDDVRSTSQGLSSFKPLPRPPP----LA 600

  Fly   304 ATLDANAAHP-SLSTNDLQQEGVKPNAEGVDEESGTNSSHISATSLHGPPLPASVSPGINESSGL 367
            ...|.....| .|...|||.....|:..|         :..||.....||...:.:||.:.:..|
Human   601 QGNDLPLGQPRKLGREDLQPPSSMPSCSG---------TVFSAPQNRSPPAGTAPTPGTSSAQDL 656

  Fly   368 --QPV--RIPPVTPSQDLP 382
              .|:  .:.|..||...|
Human   657 PSSPIYASVSPANPSSKRP 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 23/79 (29%)
WHRNXP_011516787.1 HN_L-whirlin_R1_like 37..112 CDD:259822
PDZ_signaling 138..215 CDD:238492
PDZ_signaling 277..357 CDD:238492 27/100 (27%)
HN_L-whirlin_R2_like 419..499 CDD:259823 13/86 (15%)
PDZ_signaling 827..898 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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