DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Siah1a

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006530847.3 Gene:Siah1a / 20437 MGIID:108064 Length:355 Species:Mus musculus


Alignment Length:161 Identity:43/161 - (26%)
Similarity:63/161 - (39%) Gaps:28/161 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 AAGTPA-ALCGLKPGDCVLEVNGNDVLGLRVSEIAKMV------------KSQKDCVTILCWNSE 109
            :|.||| |....||..|..::...|..|...:....:|            :..:.|   |.|:..
Mouse     6 SARTPAWAAPAFKPKPCSAQLPLRDSSGSLQAPRCNLVCTPWAAADRLFLERYRIC---LPWHKS 67

  Fly   110 --CDKDCDTNSICCAPMPTS----------LRRLSLVLESILRLVECPVCGVTISPPAMQCQNGH 162
              |..:....:....|..||          |...:.....:..|.|||||...:.||.:|||:||
Mouse    68 YICAFEMSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGH 132

  Fly   163 LLCVDCRIRSERCPVCRDFYTPRRALLAEQI 193
            |:|.:||.:...||.||......|.|..|::
Mouse   133 LVCSNCRPKLTCCPTCRGPLGSIRNLAMEKV 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 12/58 (21%)
Siah1aXP_006530847.3 RING-HC_SIAH1 112..151 CDD:319665 20/38 (53%)
Sina 155..351 CDD:367355 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3002
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D780610at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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