DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and F28E10.4

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_500590.2 Gene:F28E10.4 / 185067 WormBaseID:WBGene00017902 Length:324 Species:Caenorhabditis elegans


Alignment Length:322 Identity:62/322 - (19%)
Similarity:105/322 - (32%) Gaps:101/322 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 VKSQKD-CVTILCWNS------ECDKDCDTNSICCAPMPTSLRRLSLVLESILRLVECPV----- 146
            ||.:.| .|:.:|.||      ..||....|::..:        .|.....:||...|.|     
 Worm    38 VKIEDDMTVSYICSNSFFNGLIMGDKIIRVNNVSGS--------ASRCQSELLRGTACNVEVSRR 94

  Fly   147 CGVTISPPAMQCQNGHLLCVDCRIRSERCPVCRDFYTP----------------RRALLAEQIFL 195
            .|||    .:.|:  .|....|.:|........|...|                |||.:.:....
 Worm    95 KGVT----PVTCE--RLAKSGCNLRKGHACFVLDVERPPHMTTTSVGLKLGIIKRRAFVTKVDPN 153

  Fly   196 TIANAFEMC----------------RSENKLRQKLFAGITRPVVGRQDRITGQDTWRKRRPV-LP 243
            |||::|..|                ..:|.:|:.|    :|...|      .:.::...||: :.
 Worm   154 TIASSFFGCGDSIMDMSGAPIPMTDNPDNFIREHL----SRLSTG------AKVSFLVERPISVA 208

  Fly   244 TNKFLTKLLEGCAYSTDNLSPSNAATLLRTNTTDVAGDSSEIPARTSPVTATPPERTTMHATLDA 308
            ..|...|.:|...|....:              ::|.|..||..          |.:.||..:..
 Worm   209 MAKQYQKFIESITYDDSEV--------------EMAQDVIEIGR----------EASNMHFMILK 249

  Fly   309 NAAHPSLSTNDLQQEGVKPNAEGVDEESGTNSSHISATSLHGPPLPASVSPGINESSGLQPV 370
            ....||:.::|:::   :..:.....||...|..||:.|..     ..::..:.:...|:||
 Worm   250 KLVTPSILSSDVRR---RKKSNNKTSESTEGSITISSASTE-----MKITSDVTDFDDLKPV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 4/10 (40%)
F28E10.4NP_500590.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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