DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and gras-1

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_492164.1 Gene:gras-1 / 172549 WormBaseID:WBGene00009272 Length:245 Species:Caenorhabditis elegans


Alignment Length:141 Identity:34/141 - (24%)
Similarity:61/141 - (43%) Gaps:41/141 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 AMENYGFQLTRS-KWDPYPWVCEVAAGTPAALCGLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQK 98
            |:::|.|:.|.| .::...:|..|:|.:||..||:..||.|:.||...|:   .:..|::|:|..
 Worm    72 ALQSYVFKRTSSNSYERITYVDYVSADSPADRCGITRGDMVIAVNEKSVV---TASHAEIVESIA 133

  Fly    99 DCVTILCWNSECDKDCDTNSICCAPMPTSLRRLSLVLESILRLVECPVCGVTISPPAMQCQNGHL 163
            .|:.:                          .|.||.:.:.|:||       :|..::|.:    
 Worm   134 QCLQV--------------------------SLVLVFKDVARIVE-------LSMRSIQLR---- 161

  Fly   164 LCVDCRIRSER 174
            ..:|.:||..|
 Worm   162 FMLDAKIRELR 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 22/69 (32%)
gras-1NP_492164.1 PDZ 67..145 CDD:238080 25/101 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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