DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Patj

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_766284.2 Gene:Patj / 12695 MGIID:1277960 Length:1834 Species:Mus musculus


Alignment Length:437 Identity:78/437 - (17%)
Similarity:136/437 - (31%) Gaps:162/437 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DGQHGDGSSV----RLLRIPRAAPAMENYGFQLTRSKWDPYPWVCEVAAGTPA-ALCGLKPGDCV 74
            |.|..|...:    :||.|......||...|       |.:.::..||.|.|. .|..|:|.|.:
Mouse   549 DAQIADDEELQKYSKLLPIHTLRLGMEVDSF-------DGHHYISSVAPGGPVDTLNLLQPEDEL 606

  Fly    75 LEVNGNDVLGLRVSEIAKMVKSQKDCVTILCWNSECDKDCDTNSICCAPMPTSLRRLSLVLESIL 139
            |||||..:.|....|....:|......|::|    |.:..|..:....|.               
Mouse   607 LEVNGMQLYGKSRREAVSFLKEVPPPFTLVC----CRRLFDDEASVDEPR--------------- 652

  Fly   140 RLVECPVCGVTISPPAMQCQNGHLLCVDCRIRSERCPVCRDFYTPRRALLAEQIFLTIANAFEMC 204
                      |:.|..::.:..|  .||..|        .|......||.:.::  ......:.|
Mouse   653 ----------TMEPALLEAEVDH--SVDVNI--------EDDDDGELALWSPEV--KTVELVKDC 695

  Fly   205 RSENKLRQKLFAGITRPVVGRQDRITGQDTWRKRRPVLPTNKFL---TKLLEGCAYSTDNLSPSN 266
            :           |:...::..||            |:.||...:   :.:.:|.|..:..|.|.:
Mouse   696 K-----------GLGFSILDYQD------------PLDPTRSVIVIRSLVADGVAERSGELLPGD 737

  Fly   267 AATLLRTNTTDVAGDSSEIPARTSPVTATPP-----------------ERTTMHATLDANAAHPS 314
              .|:..|  :.:.|::.:......:.|.||                 ||.::|:..:.:::.|:
Mouse   738 --RLVSVN--EFSLDNATLAEAVEVLKAVPPGVVHLGICKPLVEDEKEERFSLHSNNNGDSSEPA 798

  Fly   315 LSTNDL-----------------------------------QQEGVKPNAEG------------- 331
            .:.:::                                   ||:.|..::|.             
Mouse   799 DAVHEIHSSLILEAPQGFRDEPYLEELVDEPFLDLGKSLQFQQKDVDSSSEAWEMHEFLSPPLDG 863

  Fly   332 --------VDEESGTNSSHISATSLHGPPLPASVSPGINESSGLQPV 370
                    ||||......|:.|...:.||      |.|.|::...||
Mouse   864 RGEEREMLVDEEYELYQDHLRAMESNPPP------PHIREAAPASPV 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 24/84 (29%)
PatjNP_766284.2 L27_2 8..65 CDD:312549
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 248..325 CDD:238492
PDZ_signaling 363..450 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..488
PDZ_signaling 572..636 CDD:238492 21/70 (30%)
PDZ 685..774 CDD:214570 17/117 (15%)
PDZ_signaling 1072..1163 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1171..1219
PDZ 1242..1327 CDD:214570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1340..1453
MPDZ_u10 <1453..1468 CDD:374710
PDZ 1469..1554 CDD:214570
PDZ_signaling 1566..1646 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1657..1676
PDZ_signaling 1707..1792 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1811..1834
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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