DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Il16

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006229550.1 Gene:Il16 / 116996 RGDID:1583872 Length:1425 Species:Rattus norvegicus


Alignment Length:489 Identity:100/489 - (20%)
Similarity:170/489 - (34%) Gaps:148/489 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GFQLTRSKWDPYP----WVCEVAAGTPAALCG-LKPGDCVLEVNGNDVLGLRVSE-IAKMVKSQK 98
            ||.:...|...|.    :|..:.||..||..| |:.||.:||:||..:.||...: :.|..:::|
  Rat   327 GFSIVGGKDSIYGPIGIYVKSIFAGGAAAADGRLQEGDEILELNGESIAGLTHQDALQKFKQAKK 391

  Fly    99 DCVTI-------------------LC---WNSECD-KDCDTNSI--CCAPMPTSLRRLSLVLESI 138
            ..:|:                   ||   .:|.|. :|....|:  ..:|..|:.....:::|..
  Rat   392 GLLTLTVRTRLTTPPSLCSHLSPPLCRSLSSSTCGAQDSSPFSLESPASPASTAKPNYRIMVEVS 456

  Fly   139 LR----------LVECP----VCGV---TISPPAMQCQNGHLLCVDCRIRSERCPV-C---RDFY 182
            |:          |...|    :.||   |:||.::...:|.|.|.|..:.....|| |   .:.|
  Rat   457 LKKEAGVGLGIGLCSIPYFQCISGVFIHTLSPGSVAHLDGRLRCGDEIVEINDSPVHCMTLNEVY 521

  Fly   183 T-----------------PRRALLAEQIFLTIANAFEMCRSENKLRQKLFAGITRPVVGRQDRIT 230
            |                 |...:..:|:...:|.|.|..:...:..|....|:.|    .:....
  Rat   522 TILSHCDPGPVPIIVSRHPDPQVSEQQLKEAVAQAVEGVKFGKERHQWSLEGVKR----LESSWH 582

  Fly   231 GQDTWRKRR------PVLPTNKFLTKLLEGCAYSTDNL--SPSNAATLLRTNTTDVA-------- 279
            |:.|..|.|      |.....|.:.:.....:|.:.:.  ||.:|...|:.:..:.:        
  Rat   583 GRPTLEKEREKHSAPPHRRAQKIMVRSSSDSSYMSGSPGGSPCSAGAELQPSEGEGSTHSPSLPP 647

  Fly   280 GDSSE----IPARTSPVTATPPERTTMHATLDANAAHPSL--------------ST--------- 317
            |:..|    :|:|  |...:||    :..:|:.: :||.|              ||         
  Rat   648 GEEQEPCPGVPSR--PHQESPP----LSESLERD-SHPPLKLKNSFEILVRKPTSTKPKPPPRKY 705

  Fly   318 --NDLQQEGVKPNAEGVDEESGTNSSHISATSLHGPPLPASVSPGINESSGLQPVRIPPVTPSQD 380
              ||.:.:......|.|.:.||           |..|..:      .|:..|.|:.:...|..:.
  Rat   706 FKNDSEPQKKLEEKEKVTDPSG-----------HTLPTCS------QETRELLPLLLQEDTAGRT 753

  Fly   381 L------PQQVVQTKPASLLYRCPCKLQDPQDPA 408
            |      |.....|:.:|.....|.:...|:.||
  Rat   754 LCTAACCPGPAASTQTSSSTEGEPRRSASPETPA 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 22/88 (25%)
Il16XP_006229550.1 PDZ_signaling 316..391 CDD:238492 20/63 (32%)
PDZ_signaling 454..536 CDD:238492 18/81 (22%)
PDZ_signaling 1207..1284 CDD:238492
PDZ 1329..1413 CDD:214570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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