DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and PATJ

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_011538764.1 Gene:PATJ / 10207 HGNCID:28881 Length:1937 Species:Homo sapiens


Alignment Length:102 Identity:28/102 - (27%)
Similarity:43/102 - (42%) Gaps:5/102 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GFHSTSNEDGQHGDGSSVRLLRIPRAAPAMENYGFQLTRSKWDPYP----WVCEVAAGTPAALCG 67
            |:|..|.....|.:.:.....:|.......|..||.:......|:.    :|..|.|...||..|
Human  1832 GYHLGSPTAEHHPEDTETPPPKIITLEKGSEGLGFSIVGGYGSPHGDLPIYVKTVFAKGAAADDG 1896

  Fly    68 -LKPGDCVLEVNGNDVLGLRVSEIAKMVKSQKDCVTI 103
             ||.||.:|.|||..:.|:...:...::|.|:..||:
Human  1897 RLKRGDQILAVNGETLEGVTHEQAVAILKHQRGTVTL 1933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 24/85 (28%)
PATJXP_011538764.1 L27_2 8..65 CDD:117611
PDZ_signaling 135..218 CDD:238492
PDZ_signaling 246..325 CDD:238492
PDZ_signaling 366..450 CDD:238492
PDZ_signaling 570..634 CDD:238492
PDZ 683..772 CDD:214570
PDZ_signaling 1066..1157 CDD:238492
PDZ 1236..1321 CDD:214570
PDZ 1459..1574 CDD:214570
PDZ_signaling 1586..1666 CDD:238492
PDZ_signaling 1729..1814 CDD:238492
PDZ_signaling 1852..1936 CDD:238492 24/82 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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