DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and pdzd3

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_002935063.2 Gene:pdzd3 / 100489736 XenbaseID:XB-GENE-486153 Length:428 Species:Xenopus tropicalis


Alignment Length:97 Identity:28/97 - (28%)
Similarity:44/97 - (45%) Gaps:18/97 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ENYGFQLTRSKWDPYPWVC---------EVAAGTPAALCGLKPGDCVLEVNGNDVLGLRVSEIAK 92
            :.|||.|.:.|       |         |:..|.||...|::.||.:|.|||..|.||...:...
 Frog   288 QGYGFLLRQEK-------CLAGQGQFLREIDPGLPAEDAGMREGDRLLGVNGQSVEGLEHEDTVS 345

  Fly    93 MVKSQKDCVTILCWNSECDKDCDTNSICCAPM 124
            |::.....||::..::|.|:  ..|.|..:|:
 Frog   346 MIQESGKQVTLIVISNEGDR--FFNEIGLSPL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 23/75 (31%)
pdzd3XP_002935063.2 PDZ_signaling 61..140 CDD:238492
PDZ_signaling 175..249 CDD:238492
PDZ_signaling 278..359 CDD:238492 23/77 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14191
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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