DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34375 and AT3G13672

DIOPT Version :10

Sequence 1:NP_001163693.1 Gene:CG34375 / 42715 FlyBaseID:FBgn0085404 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001319542.1 Gene:AT3G13672 / 820573 AraportID:AT3G13672 Length:243 Species:Arabidopsis thaliana


Alignment Length:254 Identity:46/254 - (18%)
Similarity:80/254 - (31%) Gaps:93/254 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ISQLLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVKCPVCRVPLGPRGRCLLSDKLFTLLAESF 188
            :.:||:.||....|....::|.|.|:  .|.:.:...||      ....:|.::..:..||..  
plant    14 VHELLDFPVHTNQISSAIYECPNDHI--ENPKKKPYNCP------HSGAKCDVTGDIQRLLLH-- 68

  Fly   189 PCDGGKTNKVAASQGHGKLSSVNKCTNEY-HNQPK-----------------MAL---------- 225
                      ..:..:.::|.....::.| |:.||                 :||          
plant    69 ----------LRNDHNVEMSDGRSFSHRYVHHDPKHLHHATWMLTVSYITDYLALFLQLCEFLSF 123

  Fly   226 --AKTSSGKSKCGKQISRQLETVLVDQSPREIRRKSQQGQEQE-------------------QAV 269
              .:|......||::.....|...:.::|..:......|.|:|                   |.|
plant   124 NPLETMQLLDCCGRKFCLYFEAFHLRKTPMYMAFMQFMGDEEEAMSFSYSLQVGGNGRKLTWQGV 188

  Fly   270 QEAVLPRCTLIKVQHQEAAVEHFSEEG-------------HNNMLVKP-KLKLSKKSWR 314
                 ||.  |:..|:..   ..|::|             .||...|. |||:|.:.||
plant   189 -----PRS--IRDSHKTV---RDSQDGLIITRKLALFFSTDNNTTDKELKLKVSGRVWR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34375NP_001163693.1 PDZ_canonical 11..81 CDD:467153
RING-HC_SIAHs 128..165 CDD:438233 10/36 (28%)
AT3G13672NP_001319542.1 Sina 5..232 CDD:460824 43/247 (17%)
Blue background indicates that the domain is not in the aligned region.

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