DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34375 and SIAH1

DIOPT Version :10

Sequence 1:NP_001163693.1 Gene:CG34375 / 42715 FlyBaseID:FBgn0085404 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_001006611.1 Gene:SIAH1 / 6477 HGNCID:10857 Length:313 Species:Homo sapiens


Alignment Length:95 Identity:37/95 - (38%)
Similarity:50/95 - (52%) Gaps:13/95 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ISQLLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVKCPVCRVPLGPRGRCLLSDKLFTLLAES- 187
            ::.|.|||||.:.:.||..||.:||::|:|||.:...||.||.|||.. |.|..:|    :|.| 
Human    66 LASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSI-RNLAMEK----VANSV 125

  Fly   188 -FPCDGGKTNKVAASQGHGKLSSVNKCTNE 216
             |||      |.|:|.....|....|..:|
Human   126 LFPC------KYASSGCEITLPHTEKADHE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34375NP_001163693.1 PDZ_canonical 11..81 CDD:467153
RING-HC_SIAHs 128..165 CDD:438233 17/36 (47%)
SIAH1NP_001006611.1 RING-HC_SIAH2 67..117 CDD:438410 24/50 (48%)
Sina 113..309 CDD:460824 14/48 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.