DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34375 and Patj

DIOPT Version :9

Sequence 1:NP_001163693.1 Gene:CG34375 / 42715 FlyBaseID:FBgn0085404 Length:568 Species:Drosophila melanogaster
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:322 Identity:58/322 - (18%)
Similarity:105/322 - (32%) Gaps:122/322 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 IKVQHQEAAVEHFSEEGHNNMLVKPKLKLSKKSWRIT---------GPD----QDGLRCDE---- 327
            |:|..:...|:..|.:|::|   ...::|.|||.::.         ||.    |..:..::    
  Fly   362 IRVNDRIIEVDGQSLQGYSN---HQAVELLKKSGQVVNLRLERYLRGPKFEQLQQAIAANDKLPS 423

  Fly   328 --------------VATINNGVQVQEQQQQQERQQLGHEKSASSESEYQNYHCPTGKSCSSHSYQ 378
                          |||.::.....             .:|.:.|.|.:....|       .::.
  Fly   424 SAPGTPSRAPMPTPVATTSSATTTP-------------SRSITRELEEEALPAP-------EAFM 468

  Fly   379 LGQPVANKLSTVAM-------QALAVVENSGGAS-------LSAGSHKQAPAAGV--------NQ 421
            ...|....::|..:       |.:||.::..|::       :......:|..:||        :.
  Fly   469 TTPPSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDP 533

  Fly   422 ELPLEAGSIGRREWQLLRHLSGDHRLAVLQI----YGTFGERLHVRPQLPLEGVACLRLSEESST 482
            ||..:|.:...|:||.:  :..|..:.|.||    .|..|        :.|||...:....|   
  Fly   534 ELSDDAETEIIRKWQKI--VGSDVEVIVAQIKKFAVGGLG--------ISLEGTVDVEGGRE--- 585

  Fly   483 FGHVRVHTFFLAVIAIGGGDEHAVFLWHLDHLPHGP--------TFETVIETPGHRFLGPAH 536
               ||.|.:..::                  ||.||        :.:.::|..|.|.||..|
  Fly   586 ---VRPHHYIRSI------------------LPDGPVGVNGVLRSGDELLEVNGERLLGMNH 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34375NP_001163693.1 PDZ 13..86 CDD:238080
RING 129..168 CDD:238093
PatjNP_477342.1 L27 12..70 CDD:295425
PDZ_signaling 154..226 CDD:238492
PDZ_signaling 318..400 CDD:238492 10/40 (25%)
PDZ_signaling 557..643 CDD:238492 22/102 (22%)
PDZ_signaling 726..807 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.