DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34375 and Siah1a

DIOPT Version :10

Sequence 1:NP_001163693.1 Gene:CG34375 / 42715 FlyBaseID:FBgn0085404 Length:568 Species:Drosophila melanogaster
Sequence 2:XP_006530847.3 Gene:Siah1a / 20437 MGIID:108064 Length:355 Species:Mus musculus


Alignment Length:95 Identity:37/95 - (38%)
Similarity:50/95 - (52%) Gaps:13/95 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 ISQLLECPVCLEVIKPPGWQCCNGHVLCNNCRSRSVKCPVCRVPLGPRGRCLLSDKLFTLLAES- 187
            ::.|.|||||.:.:.||..||.:||::|:|||.:...||.||.|||.. |.|..:|    :|.| 
Mouse   108 LASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSI-RNLAMEK----VANSV 167

  Fly   188 -FPCDGGKTNKVAASQGHGKLSSVNKCTNE 216
             |||      |.|:|.....|....|..:|
Mouse   168 LFPC------KYASSGCEITLPHTEKAEHE 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34375NP_001163693.1 PDZ_canonical 11..81 CDD:467153
RING-HC_SIAHs 128..165 CDD:438233 17/36 (47%)
Siah1aXP_006530847.3 RING_Ubox 109..159 CDD:473075 24/50 (48%)
Sina 155..351 CDD:460824 14/48 (29%)
Blue background indicates that the domain is not in the aligned region.

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