DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nha2 and Slc9a4

DIOPT Version :9

Sequence 1:NP_001247251.1 Gene:Nha2 / 42710 FlyBaseID:FBgn0263390 Length:714 Species:Drosophila melanogaster
Sequence 2:XP_006244800.1 Gene:Slc9a4 / 24785 RGDID:3721 Length:797 Species:Rattus norvegicus


Alignment Length:486 Identity:98/486 - (20%)
Similarity:175/486 - (36%) Gaps:151/486 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 LYIR-SHWVNTSELVALLAIFLGLWAMGWVLLPEYSQPPTVIMRIAFLFVGAQISGILVTFVHLP 299
            ||.| .|.:..|.|:.::...:|....|    ..:..||.:...|.||::...|  :|.:...:|
  Rat    89 LYHRLPHLMPESCLLIIVGALVGSIIFG----THHKSPPVMDSSIYFLYLLPPI--VLESGYFMP 147

  Fly   300 -----DMLGMLFFGVLYANLGLANFEGYQKFELFLREMALINIMLLAGLGLDGDAFKRLWFMILR 359
                 :.:|.:.:   :|.||                 ||||..   |:||.      |:|    
  Rat   148 TRPFFENIGSILW---WAGLG-----------------ALINAF---GIGLS------LYF---- 179

  Fly   360 LTLLPTIVEVAAIAGLANLTLSMPWLWGIALGLVITAVSPNVVVTVMLKLKEDRLGLNSGIHTLI 424
                  |.::.|. ||.::.|    |..:..|.:|:||.|   |.|:...:|.|  :|..::.:|
  Rat   180 ------ICQIKAF-GLGDINL----LQNLLFGSLISAVDP---VAVLAVFEEAR--VNEQLYMMI 228

  Fly   425 YAMTTCNDVVAIFMFGVIIS-----------VIFSTTSLTQQVLQGPIGIGIGLVFGYLYGSMLQ 478
            :.....||.:::.::.::|:           .:.......:.|:.|..|:..|::||::...:.:
  Rat   229 FGEALLNDGISVVLYNILIAFTKMHKFEDIEAVDILAGCARFVIVGCGGVFFGIIFGFISAFITR 293

  Fly   479 YLPSRNA---------TYANGLRFVLTILGGTIAVMGSRV------------------------- 509
            :..:.:|         :|.:.|......|.|.:|:....|                         
  Rat   294 FTQNISAIEPLIVFMFSYLSYLAAETLYLSGILAITACAVTMKKYVEENVSQTSYTTIKYFMKML 358

  Fly   510 -----------IGYTSAG-------ALGCVTTAFIARIGWR----------REETRLTPQQLQAQ 546
                       :|.::.|       |..|.|.|| .:| ||          ..:.|..|..::.|
  Rat   359 SSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAF-CQI-WRAISVFTLFYVSNQFRTFPFSIKDQ 421

  Fly   547 QI---ASVPKRLDLMWKFLKPVSFALIGKEINFNVLQGHVIGYGALL---VLVGSLFRLAFAYLS 605
            .|   :.|.........||.|:|  |..::..| |....|:.|..:.   :.:|.|.|    ||.
  Rat   422 LIIFYSGVRGAGSFSLAFLLPLS--LFPRKKLF-VTATLVVTYFTVFFQGITIGPLVR----YLD 479

  Fly   606 TYGGNL--SRKERAYITISGFPKATVQAALG 634
            ....|.  |..|..:|.:....||.::...|
  Rat   480 VRKTNKKESINEELHIRLMDHLKAGIEDVCG 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nha2NP_001247251.1 Na_H_Exchanger 279..686 CDD:294713 88/442 (20%)
Slc9a4XP_006244800.1 b_cpa1 63..621 CDD:273294 98/486 (20%)
Na_H_Exchanger 73..476 CDD:279355 88/446 (20%)
NEXCaM_BD 569..675 CDD:293250
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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