DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nha2 and pbo-4

DIOPT Version :9

Sequence 1:NP_001247251.1 Gene:Nha2 / 42710 FlyBaseID:FBgn0263390 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_509830.2 Gene:pbo-4 / 181285 WormBaseID:WBGene00003943 Length:783 Species:Caenorhabditis elegans


Alignment Length:495 Identity:96/495 - (19%)
Similarity:180/495 - (36%) Gaps:130/495 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 DEYKG---PKW-WLYIRSHWVNTSELVALLAIFLGLWAMGW-------VLLPEYSQPPTVIMRIA 280
            ||..|   ..| |.|:::..|.|     |..|.:||:.:.:       .:|||         ...
 Worm    89 DESHGISVVSWHWDYVKNELVLT-----LFFIVIGLFKLVYHHTFVTRKILPE---------SCC 139

  Fly   281 FLFVGAQISGILVTFVHLPDMLGMLFFG-VLYANLGLANFEGYQKFELFLREMALINIMLLAGLG 344
            .:|:|..|              |..|.| ..:|::....|:. :.|..:|    |..|:|.:...
 Worm   140 LIFIGIAI--------------GFFFVGDATHASIKFLEFKS-KVFFFYL----LPPIILESAYS 185

  Fly   345 LDGDAFKRLWFMILRLTLLPTIVEVAAIAGLANLTLSMPWLWG---------IALGLVITAVSPN 400
            |...||......||...::.||:.:..:|. |.|.|....:.|         :....::.||.|.
 Worm   186 LKDRAFIENIGTILLYAVVGTILNIVLLAA-ALLILIWVGIMGKYNLSVMDILTFASLVAAVDPV 249

  Fly   401 VVVTVMLKLKEDRLGLNSGIHTLIYAMTTCNDVVAIFMFGVIISVIFSTTSLTQQVLQGP----- 460
            .|:.|.     ..:|:|..::.:::..:..||.|.|..:.:.|.  |.|.         |     
 Worm   250 AVLAVF-----QEVGVNKMLYFMVFGESLFNDAVTIVCYNLAIE--FQTL---------PDFTWY 298

  Fly   461 -----------IGIGIGLVFGYLYGSMLQYLPSRNATYANGLRFV--LTILG-GTIAVMGSRVIG 511
                       :.|| ||:.|.:.|::..::    ..:...:|.|  :.:.| ..:|.:||.:..
 Worm   299 HGFLGLLSFLCVSIG-GLIIGLICGAISSFV----TKFTTDVRVVEPVVLFGMAYLAYLGSEMFH 358

  Fly   512 YTSAGALGCVTTAFIARIGWRREETRLTPQQLQAQQIASVPKRLDLMWKFLKPVSFALIG----K 572
            :          :..||.|.....:|......:..:...||.....:.....:.:.|.::|    .
 Worm   359 F----------SGIIALIACGLFQTHYACCNISYKSFTSVMYITKVCSTLCESLIFIILGVMLVN 413

  Fly   573 EINFNVLQGHVIGYGALLVLVGSLFRLAFAYLSTY------GG--NLSRKERAYITISGFPKATV 629
            |..:.....|.: :.|:.|::..:.|....:..||      ||  ::|.:|:..::..|.     
 Worm   414 EREWFWTDWHPV-FSAVSVVLCVVVRFGVTFFLTYFVNQFTGGVRHISFQEQFIMSYGGL----- 472

  Fly   630 QAALGPVALDMARAASVASPEQLALAGNLLIISVLAIIFT 669
               .|.|:..:....| |:|:   :...:|..:...|:||
 Worm   473 ---RGAVSFSLVFMIS-ANPD---VKNTMLGATYAVILFT 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nha2NP_001247251.1 Na_H_Exchanger 279..686 CDD:294713 81/432 (19%)
pbo-4NP_509830.2 Na_H_Exchanger 115..519 CDD:279355 87/464 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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