DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6660 and Elovl1

DIOPT Version :10

Sequence 1:NP_651104.1 Gene:CG6660 / 42708 FlyBaseID:FBgn0039030 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001037740.1 Gene:Elovl1 / 679532 RGDID:1587151 Length:279 Species:Rattus norvegicus


Alignment Length:283 Identity:100/283 - (35%)
Similarity:157/283 - (55%) Gaps:26/283 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VRDLYAE---HGDPRVAHLPLLGNLWIVLAIVALYVAFVLHYGPRWMANRAPFELKRVMQVYNVV 70
            |.:||.|   ..|||:.:.||:|:..::.:|:..||.|||..|||.||||.||:|:..|.|||..
  Rat     4 VVNLYQELMKCADPRIQNYPLMGSPLLITSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFS 68

  Fly    71 QVLANATIFVIGLSNTYLQPGYSWTCQPVDHTDRSPAMMKTLYASYAYYMLKYLDLLDTVFIVLR 135
            .|..:..|....|.:.:|.. |:|.|.|||.:: :|..::.:..::.:.:.|.::|:|||..:||
  Rat    69 LVTLSLYIVYEFLMSGWLST-YTWRCDPVDFSN-NPEALRMVRVAWLFMLSKVIELMDTVIFILR 131

  Fly   136 KKNSQVSFLHVYHHGGMV----FGVSIFMTFLGGSHCSMLGIINLLVHTVMYAYYYAASLGAV-K 195
            ||:.||:||||:||..:.    :|:.|....:|..|    .:||..||.|||.||..::||.| :
  Rat   132 KKDGQVTFLHVFHHSVLPWSWWWGIKIAPGGMGSFH----AMINSSVHVVMYLYYGLSALGPVAQ 192

  Fly   196 NLLWWKQRITQLQLMQFGYLTFHFLLVIVRNPC--QFPVFIAFIGFIQNIFMFSMFFDFYCKTYI 258
            ..||||:.:|.:||:||..::.|.........|  |:|:.|..|.....|| |.:|.:|:..:|.
  Rat   193 PYLWWKKHMTAIQLIQFVLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTIF-FILFSNFWYHSYT 256

  Fly   259 RKQR---------KSAEHKLKAS 272
            :.:|         .:|..|:||:
  Rat   257 KGKRLPRAVQQNGAAASMKVKAN 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6660NP_651104.1 ELO 25..265 CDD:460083 89/255 (35%)
Elovl1NP_001037740.1 ELO 23..262 CDD:460083 89/245 (36%)

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