DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6660 and Elovl4

DIOPT Version :10

Sequence 1:NP_651104.1 Gene:CG6660 / 42708 FlyBaseID:FBgn0039030 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_001178725.1 Gene:Elovl4 / 315851 RGDID:1305630 Length:314 Species:Rattus norvegicus


Alignment Length:262 Identity:95/262 - (36%)
Similarity:149/262 - (56%) Gaps:13/262 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DPRVAHLPLLGNLWIVLAIVALYVAFVLHYGPRWMANRAPFELKRVMQVYNVVQVLANATIFVIG 82
            |.||...||:.:.|..|:|..||:.|| ..||:||.:|.||:::.|:.:||...||.|..||...
  Rat    34 DKRVEDWPLMQSPWPTLSISTLYLLFV-WLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFREL 97

  Fly    83 LSNTYLQPGYSWTCQPVDHTDRSPAMMKTLYASYAYYMLKYLDLLDTVFIVLRKKNSQVSFLHVY 147
            ...:| ..|||:.||.||::: ....::...|.:.|::.|.::.|||||.:|||||:||||||||
  Rat    98 FMGSY-NAGYSYICQSVDYSN-DVNEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVY 160

  Fly   148 HHGGMVFGVSIFMTFLGGSHCSMLGIINLLVHTVMYAYYYAASLGA-VKNLLWWKQRITQLQLMQ 211
            ||..|.....|.:.::.|........:|..:|.:||:||...:.|. ::..||||:.:|.|||:|
  Rat   161 HHCTMFTLWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQ 225

  Fly   212 FGYLTFHFLLVIVRNPCQFPVFI--AFIGFIQNIFMFSMFFDFYCKTYIR----KQRKSAEHKLK 270
            | ::|.....:.:...|.||.::  |.|.:..: |:| :|.:||.:||..    |..|:|.:.:.
  Rat   226 F-HVTIGHTALSLYTDCPFPKWMHWALIAYAIS-FIF-LFLNFYTRTYNEPKKSKTGKTATNGIS 287

  Fly   271 AS 272
            |:
  Rat   288 AN 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6660NP_651104.1 ELO 25..265 CDD:460083 90/246 (37%)
Elovl4NP_001178725.1 ELO 41..278 CDD:460083 88/242 (36%)

Return to query results.
Submit another query.