DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6660 and elo-2

DIOPT Version :10

Sequence 1:NP_651104.1 Gene:CG6660 / 42708 FlyBaseID:FBgn0039030 Length:272 Species:Drosophila melanogaster
Sequence 2:NP_503114.1 Gene:elo-2 / 178532 WormBaseID:WBGene00001240 Length:274 Species:Caenorhabditis elegans


Alignment Length:246 Identity:73/246 - (29%)
Similarity:122/246 - (49%) Gaps:42/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LHYGPRWMANRAPFELKRVMQVYNVVQVLAN---ATIFVIGLSNTYLQPGY-SWTCQPVD-HTDR 104
            :::|.:.||:|.||:|:..:.::|....|.:   |...:..|...:::.|: :..||..: :||.
 Worm    47 IYFGQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYKLIPELFGVFMKDGFVASYCQNENYYTDA 111

  Fly   105 SPAMMKTLYASYAYYMLKYLDLLDTVFIVLRKKNSQVSFLHVYHHG-GMVFGVSIFMTFLGGSHC 168
            |     |.:..:|:.|.|..:|.||:|:|||||  .|.|:|.|||. ..|:.|..:......:..
 Worm   112 S-----TGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWYHHALTFVYAVVTYSEHQAWARW 169

  Fly   169 SMLGIINLLVHTVMYAYYYAASLGAVKNLLWWKQR-----ITQLQLMQF---GYLTFHFLLVIVR 225
            |:  .:||.||||||.|:      ||:.|.....|     ||.:|::||   .|:..|  ||.::
 Worm   170 SL--ALNLAVHTVMYFYF------AVRALNIQTPRPVAKFITTIQIVQFVISCYIFGH--LVFIK 224

  Fly   226 NPCQFP--------VFIAFIGFIQNIFMFSMFFDFYCKTYIRKQRKSAEHK 268
            :....|        :.|..:.:|..:|:|:.||   .|.||:|:..:...|
 Worm   225 SADSVPGCAVSWNVLSIGGLMYISYLFLFAKFF---YKAYIQKRSPTKTSK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6660NP_651104.1 ELO 25..265 CDD:460083 72/241 (30%)
elo-2NP_503114.1 ELO 29..269 CDD:460083 72/241 (30%)

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