DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and dscama

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_021334866.1 Gene:dscama / 568643 ZFINID:ZDB-GENE-050310-7 Length:2025 Species:Danio rerio


Alignment Length:570 Identity:125/570 - (21%)
Similarity:199/570 - (34%) Gaps:156/570 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GWLLHAHAGSGGFAV-----------------EAAISNRGSNSRSMSNVQQSAVAAS-------- 94
            ||.::.|....|:..                 :.|..|.|  :..:.|||:......        
Zfish   519 GWDMYIHCHVIGYPYYSIKWFKNSNLLPFNDRQRAFENNG--TLKLLNVQKELDEGEYSCHVQVQ 581

  Fly    95 ---------TLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGN--FVLLWRRGTNVLTASNIMV 148
                     .:|..:|.|:......|..:|..:.:||.|.: |:  ..:.|.:....:.|| :.|
Zfish   582 PQLFKNQSVHVTVKVPPFIQPFEFPRYSIGHRVFVPCVVRS-GDLPISITWEKDGKSINAS-LGV 644

  Fly   149 TRDERVRLID-GYNLEISDLEPQDAGDYVC--QISDKINRDQVHTVEILVPPSVRAIPTSGQLQA 210
            |.|.    || ..:|.||:|:....|.|.|  |....:.:.|...: :.|||..:..|.  ....
Zfish   645 TIDN----IDFTSSLRISNLQRVHNGTYTCIAQNDAAVVKYQSQLI-VRVPPRFKVQPQ--DQDG 702

  Fly   211 RKGGPITLECKGSGNPVPSIYWTKKSGAN---------KSTARI---GDGPILTLEKLERQQAGV 263
            ..|..:.|.|...|.|.|:|.|....||.         .|..|:   |:|.:|....|| :.||.
Zfish   703 IYGKSVILNCSADGEPRPTIEWKYSKGAGVPQFQPIALNSGFRVQLLGNGSLLIKHVLE-EDAGY 766

  Fly   264 YQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPI 328
            |.|...|.||..|:..|.|:|..|..|....:...:.:|.:.::.|....:....|.|.      
Zfish   767 YLCKVSNDVGADVSKSMYLNVKIPAMITSYPNNSLATKGEKIEMSCKAHGEKPIMVRWE------ 825

  Fly   329 QSTDRRIMATRAN----RHMLTIRHI-------------QQEDFGNYSCVADNSLGRSRKYMELS 376
            :..::...:...|    ||.:|::::             .:||.|.:||.|.||.|..|..::|:
Zfish   826 KEVEKEKQSHMINPDMWRHTVTVKNVGDEVVSTLQIYPTMREDSGFFSCHAINSYGEDRGILQLT 890

  Fly   377 GRPGAAEFYSPKWGRSPDSYNLTWKIDSYPPLEEVRLLYRRV----------------------- 418
            .:            ..|:           ||..|:|.:..|.                       
Zfish   891 VQ------------EPPE-----------PPKVEIREVKERTIALRWTMGFDGNSLITGYDIECK 932

  Fly   419 QMNETYQQPGRWHDFILTPEHRPASEPLTHIMSYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIFQ 483
            ...||:::..|..|  ::|....|          ||..|||...|...:.|||..|.:|.|:  :
Zfish   933 NKTETWERARRTRD--VSPTLNQA----------TIIELHPSSTYNIRMFAKNHIGDSEPSN--E 983

  Fly   484 FVVATNSQDI--GPEDA--EVVASS------KSRSNSASIGSLPGSTVLH 523
            ..|.|:..|.  .|:|.  |.:.|.      |:.......|.:.|..|.|
Zfish   984 LTVTTDEADPEGPPQDVTLEAITSQSIKVTWKAPLKHLQNGVIRGYQVCH 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 14/94 (15%)
IG_like 109..195 CDD:214653 23/90 (26%)
Ig 118..191 CDD:143165 21/77 (27%)
IG_like 205..274 CDD:214653 23/80 (29%)
IGc2 213..273 CDD:197706 22/71 (31%)
IGc2 301..367 CDD:197706 16/82 (20%)
FN3 392..486 CDD:238020 24/116 (21%)
dscamaXP_021334866.1 Ig 124..217 CDD:325142
I-set 236..311 CDD:254352
IG_like 321..402 CDD:214653
I-set 408..502 CDD:333254
IGc2 524..579 CDD:197706 8/56 (14%)
Ig 614..679 CDD:319273 20/70 (29%)
Ig_DSCAM 708..787 CDD:143211 26/79 (33%)
Ig 805..898 CDD:325142 20/121 (17%)
FN3 894..988 CDD:238020 25/118 (21%)
FN3 995..1092 CDD:238020 9/39 (23%)
fn3 1100..1186 CDD:306538
fn3 1199..1282 CDD:306538
Ig 1312..1377 CDD:319273
fn3 1405..1471 CDD:306538
FN3 1492..1563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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