DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klg and igsf9ba

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_009289969.2 Gene:igsf9ba / 567389 ZFINID:ZDB-GENE-060503-729 Length:1475 Species:Danio rerio


Alignment Length:560 Identity:132/560 - (23%)
Similarity:204/560 - (36%) Gaps:145/560 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VEAAISNRGSNSRSMSNVQQSAVAASTLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGN---- 129
            :.:..|.||:.::....|::.           |:|:    |.||  |:::||.|.|.:..|    
Zfish     9 IASVFSTRGTAAQGAHGVREE-----------PQFV----TARA--GESVVLGCDVSHPLNGQQT 56

  Fly   130 -FVLLW-RRGTNVLTASNIMVTRDE-------RVRLIDGYNLEISDLEPQDAGDYVCQI------ 179
             :|:.| :.|..:....|.......       |..|....:|:|..:..:|.|.|.|::      
Zfish    57 PYVVEWFKFGVPIPFFINFRFYPPHVDPEYAGRASLHGKASLQIEQVRSEDQGWYECRVLMLEQQ 121

  Fly   180 SDKI-NRDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTA 243
            .|.. |...|| :.:..||:....|.. .::||:||.|||.|...|||.|.:.|.::.....||.
Zfish   122 YDTFHNGSWVH-LTVNAPPTFSDTPPQ-YVEAREGGSITLTCTAFGNPKPVVTWLREGDQLTSTR 184

  Fly   244 R--IGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAK 306
            :  :.||. ||::.:.|:..|.|.|.|.:..|:.:.. .||.|..||.|......|.......|:
Zfish   185 KYTVSDGS-LTVQAITREDRGAYSCRAHSDQGEALHT-TRLLVQGPPYIVTPPENITVNISQNAQ 247

  Fly   307 LVCIVFADP-VATVSWYQNSFPIQ-STDRRIMATRANRHMLTIRHIQQEDFGNYSCVADNSLGRS 369
            ..|...|.| ..|.:||.....:. ..|.::.........|.|..::.||.|.|:|...||||.|
Zfish   248 FTCQAEAYPGNLTYTWYWEEDNVYFKNDLKLRVRIFIDGTLIIYRVKPEDAGKYTCSPSNSLGIS 312

  Fly   370 -------------------------RKY------------------MELSGRPGAAEFYSPKWGR 391
                                     ||.                  .|..|.|...|.| |.|.:
Zfish   313 PSASAYLTVQYPARVVNMPPVIYVPRKLSGIIRCPVDANPPVTSVRWEKDGYPLRIEKY-PGWSQ 376

  Fly   392 SPDS-------------------YNLTWKIDSYPPLEEVRL--LYRRVQMNETY-QQPGRWHDFI 434
            ..|.                   ||:...:...||...|..  .|..|:....| |:.||  :.:
Zfish   377 MTDGSIRVAEVTEDSLGTYTCVPYNVLGTMGQSPPATLVLKDPPYFNVRPGGEYRQEAGR--ELV 439

  Fly   435 L-----------TPEHRPASEPLTHIMSYTIKNLHPGGYYEAIVQAKNRYG-W-----NEVSDIF 482
            :           |.:.|...:|     |.:..||.|.|..:.:..:|..:| |     |.|:.|.
Zfish   440 IPCAASGDPEIPTIQWRKVGKP-----SRSKHNLLPSGSLQFVSLSKEDHGEWECVATNVVTSIT 499

  Fly   483 Q----FVVATNSQDIGPEDAEVVASSKSRSNSASIGSLPG 518
            .    ||:.|:..  .|.:..|.||    ::||::...||
Zfish   500 ASTRLFVIGTSPH--APTNVHVSAS----TSSANVSWEPG 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 13/54 (24%)
IG_like 109..195 CDD:214653 25/105 (24%)
Ig 118..191 CDD:143165 21/92 (23%)
IG_like 205..274 CDD:214653 24/70 (34%)
IGc2 213..273 CDD:197706 22/61 (36%)
IGc2 301..367 CDD:197706 17/67 (25%)
FN3 392..486 CDD:238020 27/136 (20%)
igsf9baXP_009289969.2 IG 30..115 CDD:214652 23/90 (26%)
I-set 139..225 CDD:254352 29/88 (33%)
I-set 229..321 CDD:333254 23/91 (25%)
Ig 345..415 CDD:325142 12/70 (17%)
Ig 438..503 CDD:319273 14/69 (20%)
FN3 511..606 CDD:238020 8/29 (28%)
FN3 622..706 CDD:238020
Atrophin-1 <924..1361 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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