DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klg and paplna

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_005169942.1 Gene:paplna / 562930 ZFINID:ZDB-GENE-070815-4 Length:1187 Species:Danio rerio


Alignment Length:402 Identity:94/402 - (23%)
Similarity:158/402 - (39%) Gaps:105/402 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HASANANASG-------LRKSSQRRNRAPLQMNCPILIVISLGWLLHAHAGSGGFAVEAAISNRG 77
            |.::|..||.       ||...::|::|.         |:||      ..|...|.....:|:.|
Zfish   754 HGNSNNFASEEECQKMCLRSELRQRDQAH---------VLSL------QHGRRRFPAHVQLSSSG 803

  Fly    78 SNSRSMSN------VQQSAVAAS------TLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGNF 130
            ::....::      :|||..|||      ::..|.|      .|...:||..:||||:|....:.
Zfish   804 AHRAQRAHQPASNAMQQSNPAASWTAEGVSIDKTDP------STVEGLVGQRVVLPCRVTPPPSS 862

  Fly   131 VLL--WRRGTNVLTASNIMVTRDERVRLIDGYNLEISDLEPQDAGDYVCQISDKINRD------- 186
            .:|  |||       ..:.|......:.:|| :|.:..:..||:|.::|..:....||       
Zfish   863 AVLVEWRR-------DGVPVDPTRHEQQLDG-SLLVGPITLQDSGWFLCVATRDDKRDHRYIYLS 919

  Fly   187 -----------------QVHTVEILVPPSVRAIPTSGQLQARKGGPITLECKGSGNPVP-----S 229
                             |.:|.:   ..|...|..|..::||.|....|:|  |..||.     :
Zfish   920 VSGSSQNNAGISEVDSSQSYTSQ---SSSRFNIDYSPLVEARAGQTAKLQC--SVLPVSAIHAVT 979

  Fly   230 IYWTKKSGANKST--ARIGDGPILTLEKLERQQAGVYQCTA-------DNGVGDPVTVDMRLDVL 285
            |:|::......|.  ::..|| .|.:::|....:|:|.||.       :..|...|..|:|: ..
Zfish   980 IHWSRAGQPLNSLRHSQHSDG-TLVIKQLTADDSGLYTCTVTDAQKFEERQVQLRVLGDLRI-TK 1042

  Fly   286 YPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHI 350
            .|.|:.|.       :|..|:|.|:|..:.| .|.|.:|..|::....|:..:...  .|.:.::
Zfish  1043 APIDVDVV-------QGSTAQLACVVTGENV-NVGWSRNGVPVRPDGHRVHVSADG--TLILNNV 1097

  Fly   351 QQEDFGNYSCVA 362
            |..|.|.|:|.|
Zfish  1098 QSVDEGTYTCNA 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 19/72 (26%)
IG_like 109..195 CDD:214653 24/111 (22%)
Ig 118..191 CDD:143165 20/98 (20%)
IG_like 205..274 CDD:214653 21/82 (26%)
IGc2 213..273 CDD:197706 17/73 (23%)
IGc2 301..367 CDD:197706 18/62 (29%)
FN3 392..486 CDD:238020
paplnaXP_005169942.1 TSP1 24..75 CDD:214559
ADAM_spacer1 181..293 CDD:310520
TSP1 303..356 CDD:214559
TSP1 388..442 CDD:214559
TSP1 449..498 CDD:214559
TSP1 504..557 CDD:214559
KU 720..771 CDD:238057 4/16 (25%)
Ig_3 839..906 CDD:316449 21/80 (26%)
IGc2 960..1022 CDD:197706 17/64 (27%)
I-set 1039..1121 CDD:333254 22/82 (27%)
PLAC 1142..1173 CDD:312271
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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