DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and lrit3a

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001122166.1 Gene:lrit3a / 558559 ZFINID:ZDB-GENE-080723-63 Length:636 Species:Danio rerio


Alignment Length:206 Identity:45/206 - (21%)
Similarity:74/206 - (35%) Gaps:61/206 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 CQISDKIN-----------RDQVHT----------------VEILVPPSVRAIPTSGQLQARKGG 214
            |:||..|.           .|||.|                ::..|.|:|....|  ::.:..|.
Zfish   205 CRISKLIELSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRAELDQC
VKPTVMTSAT--KITSPLGS 267

  Fly   215 PITLECKGSGNPVPSIYWTKKSGANKSTARIGDGP-------ILTLEKLERQQAGVYQCTADNGV 272
            .:.|.|..:|.|.|::.||...|:..:...:.:.|       ||:|..:..:.||.|:|.|.|..
Zfish   268 NVLLRCDANGFPTPTLLWTTADGSVVNNTVVQESPGEGVRWSILSLHSIVFKDAGDYRCKAKNVA 332

  Fly   273 GD-PVTVDMRLDVLYP----PDIQVEKSWIHSGEGFEAKLVCIVFADPVAT-----VSWYQNSFP 327
            |: ...:.:.:|.:.|    |.|.:.|.               ....|..|     :..:.:..|
Zfish   333 GNAEAYITLSV
DGVQPTTPFPPINITKQ---------------PEDQPTTTFTPTKMPLFTSLSP 382

  Fly   328 IQSTDRRIMAT 338
            |..|.|.:|.|
Zfish   383 ITITTRPVMTT 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518
IG_like 109..195 CDD:214653 8/44 (18%)
Ig 118..191 CDD:143165 8/40 (20%)
IG_like 205..274 CDD:214653 19/75 (25%)
IGc2 213..273 CDD:197706 19/66 (29%)
IGc2 301..367 CDD:197706 8/43 (19%)
FN3 392..486 CDD:238020
lrit3aNP_001122166.1 LRR_8 81..141 CDD:290566
leucine-rich repeat 83..106 CDD:275378
LRR_4 107..145 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_8 129..>171 CDD:290566
LRR_4 129..170 CDD:289563
leucine-rich repeat 131..154 CDD:275378
leucine-rich repeat 155..168 CDD:275378
TPKR_C2 199..249 CDD:301599 8/43 (19%)
Ig 252..343 CDD:299845 23/92 (25%)
IG_like 261..343 CDD:214653 20/81 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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