DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and lrit1a

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:526 Identity:104/526 - (19%)
Similarity:191/526 - (36%) Gaps:134/526 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IVISLGWLLHAHAGSGGFAVEAAIS-----------NRGSNSRSM--SNVQQSAVAASTLTATLP 101
            :.:.||.||    .||||.:..:..           :.||.:||:  ::.:.|.|.||     .|
Zfish     3 LTVFLGLLL----ASGGFPLVRSTCPTQCSCFYHNLSDGSRARSVICNDPEISLVPAS-----FP 58

  Fly   102 RFLSRGHTYRAVVGDTLV--LPCQV-ENLGNFVLLWRRGTNVLTASNI-----MVTRDE------ 152
                 |.|.:..:..|.:  :|.:. ..|.|...|| ...|||::.|.     :.:.:|      
Zfish    59 -----GDTSKLRIEKTAIKRIPSEAFSYLSNLEFLW-MSFNVLSSLNSDSFRGLYSLEELRLDGN 117

  Fly   153 --------------RVRLIDGYNLEISDLEPQDAGDYVCQISD-KINRDQVHTV--EIL-----V 195
                          .:||:|.:|.::|.| |.:|..|:..|:. .::.:.:.||  |:|     :
Zfish   118 SLSSFPWESLMDMPSLRLLDIHNNQLSSL-PSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTI 181

  Fly   196 PPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTARIGDGPILTLEKLERQQ 260
            .|::.| .:|..:......|...:|:        :|         ...:....|.|::..::.: 
Zfish   182 KPTLGA-ESSKLILGLHDNPWLCDCR--------LY---------DLVQFQKSPSLSVAFIDTR- 227

  Fly   261 AGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQ-N 324
               .:|.....:...:..|..|.....|.:....:.:.|..|....|.|.....|:..::|.: :
Zfish   228 ---LRCADPESLSGVLFSDAELRRCQGPRVHTAVARVRSAVGNNVLLRCGTVGVPIPELAWRRAD 289

  Fly   325 SFPIQSTDRRIMATRANR----HMLTIRHIQQEDFGNYSCVADNSLGRSRKYMELSGRPGAAEFY 385
            ..|:..|   ::...:..    .:|::..:...|.|.|.|.|.|..|.:...:.|... .|.:..
Zfish   290 GKPLNGT---VLLENSKEGIVWSILSVPAVSYRDTGKYICKATNYAGSAEAVISLIIN-DAPKME 350

  Fly   386 SPKWGRSPDSYNLTWKIDSYPPLEEVRLLYRRVQMNETYQQPGRWHDFILTPEHRPASEPLTHIM 450
            :|.....|       |:.|..|...|:..|:...: .||..|        ||::   ..||:..:
Zfish   351 NPTLDPKP-------KLKSKKPNTMVKAAYQEKHI-ATYVSP--------TPKN---GLPLSGTV 396

  Fly   451 SYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGPEDAEVVASSKSRSNSASIGS 515
            |||  ..:||  .|:...|.:|               .|:|...|:.......|...:|::|:..
Zfish   397 SYT--GPYPG--MESDNAANSR---------------MNTQTASPDGFLETNLSNLAANTSSLQQ 442

  Fly   516 LPGSTV 521
            .|...|
Zfish   443 DPDRVV 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 17/75 (23%)
IG_like 109..195 CDD:214653 26/121 (21%)
Ig 118..191 CDD:143165 20/101 (20%)
IG_like 205..274 CDD:214653 7/68 (10%)
IGc2 213..273 CDD:197706 6/59 (10%)
IGc2 301..367 CDD:197706 14/70 (20%)
FN3 392..486 CDD:238020 21/93 (23%)
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378 4/22 (18%)
LRR_8 63..119 CDD:290566 11/56 (20%)
LRR_RI <77..175 CDD:238064 22/99 (22%)
leucine-rich repeat 85..108 CDD:275378 6/23 (26%)
LRR_8 108..167 CDD:290566 11/59 (19%)
leucine-rich repeat 109..132 CDD:275378 1/22 (5%)
leucine-rich repeat 133..156 CDD:275378 9/23 (39%)
leucine-rich repeat 157..170 CDD:275378 1/12 (8%)
LRRCT 199..243 CDD:214507 6/64 (9%)
I-set 252..343 CDD:254352 18/93 (19%)
Ig 259..333 CDD:299845 15/76 (20%)
fn3 448..515 CDD:278470 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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