DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and itgb4

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_005166847.1 Gene:itgb4 / 335269 ZFINID:ZDB-GENE-030131-7209 Length:1931 Species:Danio rerio


Alignment Length:586 Identity:110/586 - (18%)
Similarity:181/586 - (30%) Gaps:232/586 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 TLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLG----NFVLLWRRGTNVLTASNIMV------T 149
            |.|||.|             |..|..|..::.:.    |..|.|:...|   |:...|      .
Zfish  1229 TQTATSP-------------GGRLYSPANIKAVATGPKNIRLNWKPSQN---ANGYKVKYWIYGD 1277

  Fly   150 RDERVRLID--GYNLEISDLEPQDAGDY---VC--------QISDKINRDQVHTVEIL------- 194
            .:::.:.:|  ....|:::|:|.  .||   ||        ..||.|   |..|:|.:       
Zfish  1278 PEDKAKFMDVKTPQAELTNLDPY--CDYEMRVCGYNALGDGNYSDII---QCQTLEDIPGEPGRL 1337

  Fly   195 ----VPPSVRAIPTSGQLQARKGG----------PITLECKGSGNPVPSIYWTKKSGANKSTARI 245
                :.|:|..:  |....|...|          ||..:.|.:|.|       ||...:....| 
Zfish  1338 AFNVISPTVTQV--SWAEPAEANGIITGYEVIYMPINEDKKPTGPP-------KKVMIDNPKKR- 1392

  Fly   246 GDGPILTLEKLERQQAGVYQCTADNGVG----DPVTVDMRLDVLYP------PDIQVEKSWIHSG 300
                :|.:|.|:..|...|:..|.|.||    ...|:::......|      |||.:..:  .:|
Zfish  1393 ----MLLIENLQPSQTYCYKVRASNKVGWGPYREATINLASQPTRPMSIPIIPDIPIVDA--EAG 1451

  Fly   301 EGFEAKLVCI--VFADPVATV---------------SWYQN-SFP------------------IQ 329
            |.:::.|:..  |...|.:::               .|.|| .||                  ..
Zfish  1452 EEYDSYLMYSNEVLRSPTSSLRPSVTDLSDDQFVNGKWEQNFLFPGGGGGSLSRNISSSSTTYSH 1516

  Fly   330 STDRRIMATRAN------------RHMLTIRH--IQQEDFGNYSCVADNSLGRSRKYME------ 374
            ||.|..:...::            .|...:|.  :.:||      |.......:|.|.|      
Zfish  1517 STPRTNVTNNSSTTTYISGKGGSTTHRYDVRDGGLLKED------VILRKRSENRHYTEGDGVRD 1575

  Fly   375 ------LSG----RPGAAEFYSPKWGRSPDSYNLTWK--------------IDSY---------P 406
                  |||    ..|.:.|..    .:..||:|:.:              :||.         .
Zfish  1576 SIVMGNLSGGLLDNLGVSSFSQ----TTSTSYSLSSRARTQSEDINDALLNLDSVLQESRFTPGV 1636

  Fly   407 PLEEVRLLYR---RVQMNETYQQPGRWHDFI---------------LTPEHRPASEPLTHIMSYT 453
            |....||::.   ...:..::|:|....|.:               ....:.||..      |..
Zfish  1637 PATPSRLVFSALGHTALKVSWQEPHCESDVLGYCVLYQLINGGDVKRIEVNNPAQN------SVL 1695

  Fly   454 IKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGPEDAEVVASSKSRSNSASIGSLPG 518
            :::|.|...|...|:|::|.||                  |||...|:....:....:.:..:||
Zfish  1696 VQDLLPNQSYIFKVKAQSREGW------------------GPEREGVITIESNVDPKSPLSPVPG 1742

  Fly   519 S 519
            |
Zfish  1743 S 1743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 8/28 (29%)
IG_like 109..195 CDD:214653 23/119 (19%)
Ig 118..191 CDD:143165 20/95 (21%)
IG_like 205..274 CDD:214653 20/82 (24%)
IGc2 213..273 CDD:197706 16/69 (23%)
IGc2 301..367 CDD:197706 17/115 (15%)
FN3 392..486 CDD:238020 22/134 (16%)
itgb4XP_005166847.1 Integrin_beta 37..457 CDD:278776
EGF_2 <468..490 CDD:285248
EGF_2 545..573 CDD:285248
Integrin_B_tail 625..709 CDD:285239
Calx-beta 991..1064 CDD:295344
FN3 1242..1326 CDD:238020 19/91 (21%)
FN3 1331..1420 CDD:238020 22/102 (22%)
fn3 1640..1720 CDD:278470 17/103 (17%)
fn3 1751..1835 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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