DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and Dscaml1

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001101611.1 Gene:Dscaml1 / 315615 RGDID:1304887 Length:2111 Species:Rattus norvegicus


Alignment Length:578 Identity:107/578 - (18%)
Similarity:197/578 - (34%) Gaps:160/578 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 MSNVQQSAVAASTLT------ATL-PRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNV 140
            ::|...||.|...||      .|| |:.|..|      :|.|::|.|.:.....|.:.|.|.|.:
  Rat   354 VTNTFGSAEANGVLTVIDPLHVTLTPKKLKTG------IGSTVILSCALTGSPEFTIRWYRNTEL 412

  Fly   141 LTASNIMVTRDERVRLIDGYNLEISDLEPQDAGDYVCQISDKINRDQVHTVEILVPPSVRAIPTS 205
            :.....:     .:|.:....|.||..:...:|.|.|..:.|....|...:.:|...:.|.:.:.
  Rat   413 VLPGEAI-----SIRGLSNETLLISSAQKSHSGAYQCFAT
RKAQTAQDFAIIVLEDGTPRIVSSF 472

  Fly   206 GQLQARKGGPITLECKGSGNPVPSIYW------TKKSGANKSTA-RIGDGPILTLEKLERQQ--- 260
            .:.....|...:|.|...|.|.|::.|      ..:.|::::.. .:.||..::...:...|   
  Rat   473 SEKVVNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRD 537

  Fly   261 AGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNS 325
            .|||:|||.|.||. .....|::|..||.|:..:: |.:..|.:..:.|.|...|..::.||:::
  Rat   538 GGVYRCTARNSVGS-AEYQARINV
RGPPSIRAMRN-ITAVAGRDTLINCRVIGYPYYSIKWYKDA 600

  Fly   326 FPIQSTDRRIMATRANRHMLTIRH----------------------------------------- 349
            ..:....|:::.......:..::.                                         
  Rat   601 LLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPPA 665

  Fly   350 -------------------------------------IQQEDF--------------GNYSCVAD 363
                                                 |:.::|              |||:|:|.
  Rat   666 SIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIAS 730

  Fly   364 NSLGRSRKYMELSGRPGAAEFYSPKWGRSPDSYN--------LTWKIDSYPPLEEVRLLYRRVQM 420
            |:.....:..:|..|      ..|::...|::.:        |...:|.|||   .:::::..:.
  Rat   731 NAAATVSRERQLIV
R------VPPRFVVQPNNQDGIYGKAGVLNCSVDGYPP---PKVMWKHAKG 786

  Fly   421 NETYQQPGRWHDFILTPEHR--PASEPL-THIMSYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIF 482
            :...||   :|...||...:  |.|..| .|::...|      |||  :.||.|..|.:....:|
  Rat   787 SGNPQQ---YHPVPLTGRIQILPNSSLLIRHVLEEDI------GYY--LCQASNGVGTDISKAMF 840

  Fly   483 QFVVATNSQDIGPEDAEVVASSKSRSNSASIGSLP-------GSTVLHTALLLALALS 533
            ..|.........|.....:.......|..:.|..|       |.||:....::..|::
  Rat   841 LTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 15/47 (32%)
IG_like 109..195 CDD:214653 17/85 (20%)
Ig 118..191 CDD:143165 15/72 (21%)
IG_like 205..274 CDD:214653 19/78 (24%)
IGc2 213..273 CDD:197706 18/69 (26%)
IGc2 301..367 CDD:197706 15/157 (10%)
FN3 392..486 CDD:238020 24/104 (23%)
Dscaml1NP_001101611.1 IG 101..173 CDD:214652
IGc2 101..168 CDD:197706
Ig 183..276 CDD:299845
IG_like 195..276 CDD:214653
I-set 291..369 CDD:254352 5/14 (36%)
IGc2 298..359 CDD:197706 1/4 (25%)
IGc2 386..447 CDD:197706 15/65 (23%)
I-set 466..560 CDD:254352 22/94 (23%)
Ig 466..556 CDD:299845 21/90 (23%)
IGc2 577..635 CDD:197706 7/57 (12%)
IG_like 665..744 CDD:214653 9/78 (12%)
Ig 673..739 CDD:143165 8/65 (12%)
I-set 748..843 CDD:254352 25/108 (23%)
Ig7_DSCAM 765..843 CDD:143211 23/91 (25%)
I-set 849..942 CDD:254352 8/50 (16%)
Ig 861..949 CDD:299845 7/38 (18%)
FN3 945..1039 CDD:238020
FN3 1046..1143 CDD:238020
fn3 1151..1237 CDD:278470
FN3 1249..1340 CDD:238020
IGc2 1364..1428 CDD:197706
FN3 1442..1532 CDD:238020
FN3 1546..1618 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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