DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and ncam1a

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_009293555.1 Gene:ncam1a / 30447 ZFINID:ZDB-GENE-990415-31 Length:1010 Species:Danio rerio


Alignment Length:605 Identity:145/605 - (23%)
Similarity:220/605 - (36%) Gaps:163/605 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGN 129
            |.:..|..|..||.     .:::...|..:.|.:...|:.....|  |.:...:.|.|..:....
Zfish   182 GDYTCEGRIMARGE-----IDLRVIKVIVNVLPSIRTRYTELNAT--ADINQAVTLACHADGYPE 239

  Fly   130 FVLLWRRGTNVLTASNIMVTRDERVRL-IDGYNLEISDLEPQDAGDYVCQISDKI-NRDQVHTVE 192
            ..:.|.||       |..:..||:..| .||..|.|.|:...|.|||.|...:|. .|.:..|:.
Zfish   240 PTVKWARG-------NTELESDEKYSLNEDGSELTIKDVNKLDEGDYKCIARNKAGERSEEVTLN 297

  Fly   193 ILVPPSVRAI--PTSGQLQARKGGPITLECKGSGNPVPSIYWT--------------------KK 235
            :.|.|.:..:  .|:.:|:.:    |||.|:.:|:|.|:|.|:                    |.
Zfish   298 VFVQPKITFLENQTASELEEQ----ITLTCEATGDPTPNIIWSFGRRVFTENEQASWTRPEKHKS 358

  Fly   236 SGAN---KSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWI 297
            ...|   :|.||:..   |||:.::...||.|.|||.|.:|..:. .|.|:|.|.|.||..:: :
Zfish   359 LDGNVVVRSDARVSS---LTLKYVQFTDAGQYLCTARNSIGQDIQ-SMYLEVRYAPKIQGPQA-V 418

  Fly   298 HSGEGFEAKLVCIVFADPVATVSWYQNSFPIQS---TDRRIMATRANRHMLTIRHIQQEDFGNYS 359
            .:.||..|.:.|...|.|.|:|.|:::...:.|   |:.:|..| .....|.:....|.|||:|:
Zfish   419 FTWEGNPANITCEALAHPGASVLWFRDGQQLPSANTTNVKIYNT-PTVSFLEVTPDSQNDFGSYN 482

  Fly   360 CVADNSLGRSRKYMEL--SGRPGA--------------AEFYSP--KWGRSPDSYNLTWKI---- 402
            |.|.|.:|...|...|  :..|.|              .||..|  ..|.....|...|:|    
Zfish   483 CTATNVIGTESKEFILVQADVPSAPSIERVEPYSSTAMIEFEEPASSGGVPVLKYKAEWRIAGQD 547

  Fly   403 --DSYPPLEEVRLLYRRVQM--NETYQ----------------------QPGRWHDFILTPEHRP 441
              |....||:...|...|.:  ..||:                      ||.|. .|.::|| .|
Zfish   548 WTDREYELEDGLNLITIVGLKPETTYEVKISAINGKGEGESSAPESFKTQPVRL-PFRMSPE-TP 610

  Fly   442 ASEPLT----------------------HIMSYTIKNLHPGG----YYEAIVQAKNRYGWN---- 476
            .|.|.|                      .:..:.||. ..||    :|....:||||..|.    
Zfish   611 TSIPPTTADIKGEPNPPKLEAKPQSTGNEMKVHFIKQ-DDGGSPIKHYLVRYRAKNRQDWKPEIR 674

  Fly   477 --EVSDIF------------QFVVATNSQDIG----------PEDAEVVASSKSRSNSASIGSLP 517
              :.||..            .:|:|.|.:...          ||...:..:|......|.:|.| 
Zfish   675 MPDASDYIVLRGLDWNTEYEVYVIAENQRGRSEPGTLSFRTLPEPTAIPETSSGLGTGAIVGIL- 738

  Fly   518 GSTVLHTALLLALALSNCQF 537
              .|:...||..:.:: |.|
Zfish   739 --IVVFILLLFGVDVT-CYF 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 12/58 (21%)
IG_like 109..195 CDD:214653 24/87 (28%)
Ig 118..191 CDD:143165 21/74 (28%)
IG_like 205..274 CDD:214653 25/91 (27%)
IGc2 213..273 CDD:197706 24/82 (29%)
IGc2 301..367 CDD:197706 22/68 (32%)
FN3 392..486 CDD:238020 32/167 (19%)
ncam1aXP_009293555.1 Ig 20..112 CDD:299845
I-set 21..111 CDD:254352
IG_like 121..200 CDD:214653 5/22 (23%)
IGc2 128..189 CDD:197706 2/6 (33%)
Ig 208..301 CDD:299845 26/101 (26%)
IG_like 219..298 CDD:214653 24/87 (28%)
Ig 300..406 CDD:299845 31/113 (27%)
IG_like 308..406 CDD:214653 29/105 (28%)
ig 413..498 CDD:278476 25/86 (29%)
IG_like 415..498 CDD:214653 24/84 (29%)
fn3 505..589 CDD:278470 15/83 (18%)
FN3 624..715 CDD:238020 15/91 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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