DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and Lsamp

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:369 Identity:95/369 - (25%)
Similarity:153/369 - (41%) Gaps:54/369 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NRAPLQMN-CPILIVISLGWLLHAHAGSGGFAVEAAISNRGSNSRSMSNVQQSAVAASTLTATLP 101
            |:.|.::| .||.|..:...:........|..|.:...|||:::   ..|:|             
Mouse    28 NQPPAEVNLSPITIPGTEETMRKKAKEEEGLPVRSVDFNRGTDN---ITVRQ------------- 76

  Fly   102 RFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLID----GYNL 162
                         |||.:|.|.||: .|..:.|...:.::.|.:...:.|.||.|..    .|:|
Mouse    77 -------------GDTAILRCVVED-KNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSL 127

  Fly   163 EISDLEPQDAGDYVC--QISDKINRDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLECKGSGN 225
            .|..::..|.|.|.|  |...:....||:.: :.|||.:..|  |..:...:|..:||.|..:|.
Mouse   128 RIQKVDVYDEGSYTCSVQTQHEPKTSQVYLI-VQVPPKISNI--SSDVTVNEGSNVTLVCMANGR 189

  Fly   226 PVPSIYWTKKSGANKSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDI 290
            |.|.|.|...:...:...  |:...|.:..:.|:|:|.|:|.|.|.|.......:::.|.|||.|
Mouse   190 PEPVITWRHLTPLGREFE--GEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTI 252

  Fly   291 QVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHIQQEDF 355
            ...|| ..:..|.:|.|.|...|.|.....||::...|.|.:...:.:...:..||:.::.:|.:
Mouse   253 TESKS-NEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEEHY 316

  Fly   356 GNYSCVADNSLGRSRKYMELSGRP-----------GAAEFYSPK 388
            |||:|||.|.||.:...:.|..|.           |....:.||
Mouse   317 GNYTCVAANKLGVTNASLVLFKRVLPTVPHPIQEIGTTVHFKPK 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 24/91 (26%)
Ig strand B 118..122 CDD:409353 1/3 (33%)
Ig strand C 131..135 CDD:409353 0/3 (0%)
Ig strand E 160..164 CDD:409353 2/3 (67%)
Ig strand F 174..179 CDD:409353 2/6 (33%)
Ig strand G 188..191 CDD:409353 1/2 (50%)
Ig_3 196..270 CDD:464046 21/73 (29%)
Ig_3 287..364 CDD:464046 24/76 (32%)
FN3 392..486 CDD:238020
LsampXP_030104997.1 Ig 69..159 CDD:472250 26/120 (22%)
Ig strand B 80..84 CDD:409353 1/3 (33%)
Ig strand C 92..96 CDD:409353 0/3 (0%)
Ig strand E 125..129 CDD:409353 2/3 (67%)
Ig strand F 139..144 CDD:409353 2/4 (50%)
Ig strand G 152..155 CDD:409353 0/2 (0%)
Ig_3 162..232 CDD:464046 21/73 (29%)
Ig_3 249..325 CDD:464046 24/76 (32%)
Blue background indicates that the domain is not in the aligned region.

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