DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and LRIT1

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_056428.1 Gene:LRIT1 / 26103 HGNCID:23404 Length:623 Species:Homo sapiens


Alignment Length:497 Identity:108/497 - (21%)
Similarity:169/497 - (34%) Gaps:156/497 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SNSRSMSNVQQSAVAASTL-TATLPRFLSRGHTYRAVVG---DTLVLPCQVENLGNFVLLWRRGT 138
            |:::.|...|:..|:.:.| |...|    .||..|.|:|   :.....|::.:|           
Human   163 SSNQLMRLPQELIVSWAHLETGIFP----PGHHPRRVLGLQDNPWACDCRLYDL----------- 212

  Fly   139 NVLTASNIMVTRDERVRLIDGY--NLEISDLE-----PQD-AGDYVCQIS-DKINRDQVHTVEIL 194
                           |.|:||:  ||...:.|     |:. ||....|:. .|....::|     
Human   213 ---------------VHLLDGWAPNLAFIETELRCASPRSLAGVAFSQLELRKCQGPELH----- 257

  Fly   195 VPPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSG------ANKSTARIGDG-PILT 252
              |.|.:|      ::..||...|.|..:|.|.|.:.|.:.:|      .::..:..|.. .:|.
Human   258 --PGVASI------RSLLGGTALLRCGATGVPGPEMSWRRANGRPLNGTVHQEVSSDGTSWTLLG 314

  Fly   253 LEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKS------WIHSGEGFEAKLVCIV 311
            |..:....:|.|.|.|.|.:|...|| :.|.|..|| ...|.|      |..:|.|.||      
Human   315 LPAVSHLDSGDYICQAKNFLGASETV-ISLIVTEPP-TSTEHSGSPGALWARTGGGGEA------ 371

  Fly   312 FADPVATVSWYQNSFPIQSTDR----RIMAT----RANRHMLTIRHIQQEDFGNYSCVADNSLGR 368
                    :.|.|....:...:    .::||    .:.:..||:.|.|.:..|..|         
Human   372 --------AAYNNKLVARHVPQIPKPAVLATGPSVPSTKEELTLEHFQMDALGELS--------- 419

  Fly   369 SRKYMELSGRPGAAEFYSPK----WGRSPDSYNLTWKIDSYPPLEEVRLLYR---RVQMNETYQQ 426
                   .||.|.:|....:    .|.:..|.:|.||...........:||.   :..|.....|
Human   420 -------DGRAGPSEARMVRSVKVVGDTYHSVSLVWKAPQAKNTTAFSVLYAVFGQHSMRRVIVQ 477

  Fly   427 PGRWHDFILTPEHRPASEPLTHIMSYTIKNLHPGGYYEAIVQAKNRYGWNEVSDIFQFVVATNSQ 491
            ||:                 |.:   ||..|.|...|.|.|..:......|...||    :||  
Human   478 PGK-----------------TRV---TITGLLPKTKYVACVCVQGLVPRKEQCVIF----STN-- 516

  Fly   492 DIGPEDAEVVASSKSRSNSASIGSLPGSTVLHTALLLALALS 533
                   |||.:..::       .|....|:..|:::||.|:
Human   517 -------EVVDAENTQ-------QLINVVVISVAIVIALPLT 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 13/49 (27%)
IG_like 109..195 CDD:214653 18/97 (19%)
Ig 118..191 CDD:143165 15/81 (19%)
IG_like 205..274 CDD:214653 17/75 (23%)
IGc2 213..273 CDD:197706 17/66 (26%)
IGc2 301..367 CDD:197706 13/73 (18%)
FN3 392..486 CDD:238020 21/96 (22%)
LRIT1NP_056428.1 LRR 1 60..81
leucine-rich repeat 61..84 CDD:275378
LRR_8 63..143 CDD:290566
LRR 2 84..105
leucine-rich repeat 85..132 CDD:275378
LRR 3 108..129
LRR_8 131..202 CDD:290566 12/42 (29%)
LRR_4 131..171 CDD:289563 2/7 (29%)
LRR 4 132..153
leucine-rich repeat 133..156 CDD:275378
LRR 5 156..177 3/13 (23%)
leucine-rich repeat 157..180 CDD:275378 4/16 (25%)
leucine-rich repeat 181..205 CDD:275378 8/27 (30%)
TPKR_C2 201..>240 CDD:301599 10/64 (16%)
Ig 267..345 CDD:299845 21/78 (27%)
IG_like 267..345 CDD:214653 21/78 (27%)
FN3 431..498 CDD:214495 18/86 (21%)
LRR 6. /evidence=ECO:0000305 571..594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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