DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klg and Lrit3

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:420 Identity:84/420 - (20%)
Similarity:131/420 - (31%) Gaps:153/420 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 CQISDKINRDQV--HTVEILVP-------------------------PSVRAIPTSGQLQARKGG 214
            |.||..|...:|  |.|.:|.|                         |||....|  ::.:..|.
Mouse   207 CHISKVIELSKVTDHAVVLLDPLMVCSEPERFQGILFQRVELEKCLKPSVMMSAT--KITSALGS 269

  Fly   215 PITLECKGSGNPVPSIYWTKKSGANKSTARIGDGP-------ILTLEKLERQQAGVYQCTADN-- 270
            .:.|.|...|:|.|.:.||:..|:..:...|.:.|       |::|..:..:.||.|:|.|.|  
Mouse   270 NVLLRCDAKGHPTPQLTWTRSDGSTVNYTVIQESPGEGIRWSIISLTSISHKDAGDYRCKAKNLA 334

  Fly   271 GVGD---PVTVDMRLDVLYPPD---------------------IQVEKSWIHSGEGFEAKLVCIV 311
            |:.:   .|||...:.....||                     ....|||:..|       :...
Mouse   335 GISEAVVTVTVVGGVTTTLSPDSSERSPGEPPEQHPQPGLGGSTPPSKSWLSPG-------LTSA 392

  Fly   312 FADPVATVSWYQNSF--------PIQSTDRRIMATRANRHMLTIRHIQQEDFGNYSCVADNSLGR 368
            .:.|..:.:.|.:::        ||.|......:.:.:....|.|...|....:..       |:
Mouse   393 PSYPTPSAALYTSTWSPPPSSLPPIFSAASATTSVQTSISGRTARTSHQPPLLHPG-------GK 450

  Fly   369 SRKYMELSGRPGAAEFYSPKWGRSPDSYNLTWKIDSYPPL-----EEVRLLYRRVQMNETYQQPG 428
            |...:|.:||                         .:|||     ||:.||.:...| ||     
Mouse   451 SNAKIEKNGR-------------------------KFPPLSASKKEELALLDQAAPM-ET----- 484

  Fly   429 RWHDFILTPEHRPASEPLTHIMSYTIKNLHPG---GYYEAIVQAKNRYGWNEVSDIFQFVVATNS 490
                                  :.|||:|...   |....::       ||..|...:..|....
Mouse   485 ----------------------NVTIKDLRVARETGVSVTLM-------WNSSSSTQESSVTVLY 520

  Fly   491 QDIGPEDAEVVASSKSRSNSASIGSL-PGS 519
            ...|.:|..:|.:.....|.|:|..| |||
Mouse   521 SKYGEKDLLLVNADDYGKNQATINGLEPGS 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518
IG_like 109..195 CDD:214653 7/19 (37%)
Ig 118..191 CDD:143165 6/15 (40%)
IG_like 205..274 CDD:214653 20/77 (26%)
IGc2 213..273 CDD:197706 20/68 (29%)
IGc2 301..367 CDD:197706 8/73 (11%)
FN3 392..486 CDD:238020 18/101 (18%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79
LRR_8 61..117 CDD:290566
LRR 2. /evidence=ECO:0000255 80..103
leucine-rich repeat 83..106 CDD:275378
LRR 3. /evidence=ECO:0000255 104..128
LRR_8 105..165 CDD:290566
LRR_4 106..146 CDD:289563
leucine-rich repeat 107..130 CDD:275378
LRR_4 129..170 CDD:289563
LRR 4. /evidence=ECO:0000255 129..151
leucine-rich repeat 131..154 CDD:275378
LRR 5. /evidence=ECO:0000255 152..175
leucine-rich repeat 155..168 CDD:275378
Ig 254..335 CDD:299845 23/82 (28%)
IG_like 263..339 CDD:214653 20/75 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391 6/47 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464 8/70 (11%)
FN3 489..563 CDD:238020 17/69 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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