DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and igcm-2

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001362087.1 Gene:igcm-2 / 180913 WormBaseID:WBGene00020130 Length:802 Species:Caenorhabditis elegans


Alignment Length:380 Identity:97/380 - (25%)
Similarity:151/380 - (39%) Gaps:103/380 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 YRAVVGDTLVLPCQVE--NLGNFVLLWRR-GTNVLTA-----SNIMVTRDERVRLIDGY-NLEIS 165
            |....|..:.|||.:.  |..:|.|.||: |..:|:|     .::..|...|:.. ||: .:.|.
 Worm    23 YWGKAGAPITLPCSISLFNEESFSLDWRKDGQLILSAFGQEQGHVTPTLQGRLAR-DGFLGITIH 86

  Fly   166 DLEPQDAGDYVC---QISDKINRDQ--------VHTVEILVPPSVRAIPTSGQLQARKGGPITLE 219
            .:...|||.|.|   :.|.:..|.:        |:...:::.||..||     :..:.|..:..|
 Worm    87 SVTDGDAGVYQCIVTKFSKQPTRPEKGLSAKLVVNVPPVIISPSKNAI-----IHKKVGADLIFE 146

  Fly   220 CKGSGNPVPSIYWTKKSGANKSTARIGDGPILTLEKLERQQAGVYQCTADNGVGDPV-TVDMR-- 281
            ||..|.|.|.|.|::....      |...|:|||..||....|:|.|.|.|..|:.. ::|:|  
 Worm   147 CKAEGAPSPEITWSRNEQI------ISTSPVLTLSNLEEGDKGLYTCLAVNIEGNSTSSIDVRFT 205

  Fly   282 ----LDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVA-TVSWYQNSFPIQSTDRRIMATRAN 341
                ||:     |.:.|:.|   ||......|...|...| :.||.....||::|.   :..|:|
 Worm   206 KATILDL-----IPLNKTVI---EGSNVFWHCHANAQATAISYSWLFEKKPIKTTS---LGLRSN 259

  Fly   342 RHM--LTIRHIQQEDFGNYSCVADNSLGR---SRKYMELSGRPGAAEFYSPK------------W 389
            ...  |:::.:::.|.|.|:|.|.||.|.   |..|:.:        ||.|:            .
 Worm   260 IRSGDLSLQDVRKSDSGWYTCEAKNSAGETTSSTAYLHV--------FYPPEPLSSHQPVQTVAS 316

  Fly   390 GR------------SPDSYNLTWKIDSYPPLEEVRLLYRRVQMNE----TYQQPG 428
            ||            :|.||  ||..:.:         |...|.:.    :|.:||
 Worm   317 GRNTTVSCDVIANPTPTSY--TWSKNGH---------YLPTQASSHIIISYAKPG 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 26/104 (25%)
Ig strand B 118..122 CDD:409353 1/3 (33%)
Ig strand C 131..135 CDD:409353 1/3 (33%)
Ig strand E 160..164 CDD:409353 0/4 (0%)
Ig strand F 174..179 CDD:409353 2/7 (29%)
Ig strand G 188..191 CDD:409353 1/2 (50%)
Ig_3 196..270 CDD:464046 24/73 (33%)
Ig_3 287..364 CDD:464046 21/79 (27%)
FN3 392..486 CDD:238020 10/41 (24%)
igcm-2NP_001362087.1 Ig_3 28..101 CDD:464046 22/73 (30%)
Ig 124..200 CDD:472250 26/86 (30%)
Ig strand B 143..147 CDD:409358 0/3 (0%)
Ig strand C 156..160 CDD:409358 1/3 (33%)
Ig strand E 171..174 CDD:409358 1/2 (50%)
Ig strand F 184..189 CDD:409358 2/4 (50%)
Ig strand G 195..198 CDD:409358 0/2 (0%)
IG_like 214..298 CDD:214653 25/89 (28%)
Ig strand C 239..243 CDD:409353 1/3 (33%)
Ig strand E 263..267 CDD:409353 1/3 (33%)
Ig strand F 277..282 CDD:409353 2/4 (50%)
Ig strand G 291..294 CDD:409353 1/2 (50%)
Ig_3 301..371 CDD:464046 13/71 (18%)
Ig_3 388..454 CDD:464046
FN3 476..548 CDD:238020
FN3 <573..>643 CDD:442628
Blue background indicates that the domain is not in the aligned region.

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