DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and rig-4

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_501339.2 Gene:rig-4 / 177597 WormBaseID:WBGene00004371 Length:2325 Species:Caenorhabditis elegans


Alignment Length:546 Identity:114/546 - (20%)
Similarity:190/546 - (34%) Gaps:127/546 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 ISLGWLLHAHAGSG---GFAV-----EAAISNRGSNSRSMSNVQQSAVAA----STLTATLPRFL 104
            :.:.|.|:....||   |...     ...|||..|.:|....::..|.||    |...:....|:
 Worm   257 VRIRWFLNGQQISGSEVGMTTTLNNRRLIISNPSSFTRGEHKLECRADAAMGRTSDQKSAYMTFI 321

  Fly   105 SR------GHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLIDGYNLE 163
            ||      .:..:..||.:|.|.|.|:...:..:.|.:...::|.....:|.|.           
 Worm   322 SRPILKDLPNEIQKTVGSSLSLKCSVKKKSSMDIKWYKNGLMMTTQRGKLTIDR----------- 375

  Fly   164 ISDLEPQDAGDYVCQ---------------------------------ISDKINR---------- 185
               ::..|.|.|.|:                                 :.::|:.          
 Worm   376 ---IKQDDFGLYQCEATNAAGADLASVWVKEGEANETVATEMSEDGMSLEEEISMETPPPRKLKF 437

  Fly   186 -DQVHTVEILVP------PSVRAIPTSGQLQARKG-GPITLECKGSGNPVPSIYWTKKSGANKST 242
             |...:.|.|.|      ||.:.|.|...|....| ..|.:||..:|:|.|:|.|. .:|....|
 Worm   438 FDNSKSQEQLFPFTSELEPSQKLIKTPKDLTVASGTDRIMMECAATGSPPPNIIWL-LNGHEIQT 501

  Fly   243 ARI-----GDGPILTLEKLERQQAGVYQC-TADNGVGDPVTVDMRLDVLY---PPDIQVEKSWIH 298
            ..:     .||  |.:..:.:...|.|.| .:.:.|.....|.:..|.|.   |.|   :||.| 
 Worm   502 DNVKYDLTNDG--LAIHDIRKSDEGEYTCEISGSNVKATANVQVNGDSLIEYGPAD---QKSLI- 560

  Fly   299 SGEGFEAKLVCIVFADPV--ATVSWYQNS--FPIQSTDRRIMATRANRHMLTIRHIQQEDFGNYS 359
               |...:..|.|..:.|  |:|.||.|.  .|:.. :..:..:|..:..|.||.:..::.|.|.
 Worm   561 ---GTNVEFSCEVAKEYVRKASVEWYLNDVLLPVNG-NSGLRISRNRKGSLIIRQVGPDNTGEYR 621

  Fly   360 C--VADNSLGRSRKYMELSGRPG-----AAEFYSPKWGRSPDSYNLTWK--IDSYPPLEEVRLLY 415
            |  ..|.....:...:::..:|.     .||.::.   ..|....:.|.  .|...|     ::.
 Worm   622 CRVTVDGREENASAMLQIIEKPAMPERVRAELHNE---TMPAKVRVRWNEGFDGNEP-----IIK 678

  Fly   416 RRVQMNETYQQPGRWHDFILTPEHRPASEPLTHIMSYTIKNLHPGGYYEAIVQAKNRYGWNEVSD 480
            ..::| .|....|.|.|:....::.|..|......: .|::|.|....|..|.|.|::|..:.| 
 Worm   679 HAIEM-RTMGPTGLWSDWTTAIDNIPKEEGKPCCWT-DIEDLRPSSTAEFRVVASNKHGPGKPS- 740

  Fly   481 IFQFVVATNSQDIGPEDAEVVASSKS 506
            :..:.|....|........|.||::|
 Worm   741 LPSYSVTMPQQPPSAAPRNVAASARS 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 20/78 (26%)
IG_like 109..195 CDD:214653 17/129 (13%)
Ig 118..191 CDD:143165 14/116 (12%)
IG_like 205..274 CDD:214653 19/75 (25%)
IGc2 213..273 CDD:197706 17/66 (26%)
IGc2 301..367 CDD:197706 18/71 (25%)
FN3 392..486 CDD:238020 20/95 (21%)
rig-4NP_501339.2 IG_like 330..402 CDD:214653 14/85 (16%)
IGc2 338..393 CDD:197706 13/68 (19%)
I-set 459..543 CDD:254352 22/86 (26%)
IGc2 478..534 CDD:197706 15/58 (26%)
IG_like 553..639 CDD:214653 23/93 (25%)
Ig 564..635 CDD:143165 17/71 (24%)
FN3 643..747 CDD:238020 23/114 (20%)
FN3 756..850 CDD:238020 4/11 (36%)
FN3 858..954 CDD:238020
FN3 959..1042 CDD:238020
FN3 1057..1151 CDD:238020
FN3 1156..1251 CDD:238020
FN3 1258..1356 CDD:238020
FN3 1361..1453 CDD:238020
FN3 1464..1560 CDD:238020
FN3 1572..1664 CDD:238020
FN3 1679..1764 CDD:238020
FN3 1774..1858 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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