DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and rig-5

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:466 Identity:113/466 - (24%)
Similarity:193/466 - (41%) Gaps:102/466 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TAHASANANASGLRKSSQRRNRAPLQMNCPI-----LIVISLGWLLHAHAGSGGFAVEAAISNRG 77
            ||..||.:.|...|    .|.|..:..:.|:     |..:..|.||          |.....:||
 Worm    31 TARDSALSGAPTFR----GRGRFVILFHIPLQEKMYLFALLCGVLL----------VFKQACSRG 81

  Fly    78 SNSRSMSNVQQSAVAASTLTATLPRFLSRGHTYRAVVGDTLVLPCQVENLGNFVLLWRRGTNVLT 142
                :...:||.:::::.                |::|..:...|.|.:||:.::.:.:.    .
 Worm    82 ----APPTIQQPSMSSAV----------------ALLGQDVDFTCIVNDLGSHMVAFVKA----D 122

  Fly   143 ASNIMVTRDERV-----------RLIDGYN---LEISDLEPQDAGDYVCQISDKINRDQVHTVEI 193
            :...:::.||:|           |:.|.:|   |.|.:::..|.|:|.|||:.:........:::
 Worm   123 SPPRLLSFDEKVFRRRNKYELKPRIGDLHNEWVLTIKNVQESDRGNYSCQINTEPITLSTGELDV 187

  Fly   194 LVPPSV-RAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKK-------SGANKSTARIGDGPI 250
            .|||.| |:.|.:  ::.|:|..::|.||..|||.|::.|.::       :||....|.:..||:
 Worm   188 KVPPVVSRSTPAA--VEVREGNNVSLTCKADGNPTPTVIWRRQDRQIIRYNGATGFGASVFHGPV 250

  Fly   251 LTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADP 315
            |.|.|:.|:....|.|.|.||:....:..::|.|.:||.:|.:...:.:..|..|::||...|.|
 Worm   251 LHLTKVSRKHMSEYLCVASNGIPPDESWTVKLLVTFPPLVQAQSETVQASVGSMARMVCTTEAWP 315

  Fly   316 VATVSWYQNSFPIQSTDRRIMATRANR-----HMLTIRHIQQEDFGNYSCVADNSLG-------- 367
            ...:.|.::..|:..::...|....:.     |:|.||::|...||.|.|||.|..|        
 Worm   316 RPEMGWEKDGEPVYESNNVAMTHTVSGQYHSVHILEIRNVQSSHFGVYRCVAKNDNGIHHSQVTL 380

  Fly   368 ---------RSRKYMELSGRPGAAEFYSPKWGRSPDSYNL-TWKIDS------YPPLEEVRLLYR 416
                     .|....|.||.|..   ||.......:..|| ..|.||      .||..|   .|.
 Worm   381 NQISHNHFTNSNLIPEGSGMPRG---YSEDDEADEEEDNLENQKNDSEEEDSQSPPQLE---FYS 439

  Fly   417 RVQMNETYQQP 427
            :.:.:|:...|
 Worm   440 QARRHESRNAP 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 20/99 (20%)
Ig strand B 118..122 CDD:409353 0/3 (0%)
Ig strand C 131..135 CDD:409353 0/3 (0%)
Ig strand E 160..164 CDD:409353 2/6 (33%)
Ig strand F 174..179 CDD:409353 2/4 (50%)
Ig strand G 188..191 CDD:409353 0/2 (0%)
Ig_3 196..270 CDD:464046 27/81 (33%)
Ig_3 287..364 CDD:464046 23/81 (28%)
FN3 392..486 CDD:238020 11/43 (26%)
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 20/116 (17%)
Ig strand B 102..106 CDD:409353 0/3 (0%)
Ig strand C 118..122 CDD:409353 0/7 (0%)
Ig strand E 154..158 CDD:409353 1/3 (33%)
Ig strand F 168..173 CDD:409353 2/4 (50%)
Ig_3 190..270 CDD:464046 27/81 (33%)
Ig_3 287..369 CDD:464046 23/81 (28%)

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