DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment klg and Papln

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:NP_001192272.1 Gene:Papln / 170721 MGIID:2386139 Length:1302 Species:Mus musculus


Alignment Length:341 Identity:82/341 - (24%)
Similarity:127/341 - (37%) Gaps:99/341 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RAVVGDTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRLIDGYNLEISDLEPQDAGDY 175
            :|..|..:.|.|.......|...|::....::::...:..|.        :|.||.|.|:|||.|
Mouse   937 QAAPGQAVQLFCPGNIPSEFQAGWQKEGRPISSNRYQLQADG--------SLIISRLRPEDAGIY 993

  Fly   176 VC----------QISDKI--------------------NRDQVHTV------------EILVPPS 198
            .|          :|..::                    |.|..|..            .:|.|..
Mouse   994 SCGSHRPGHEPQEIQLRVTGGDMAVFPEGQPRHFPEPRNPDLGHGPPHRGTGAEAGGHRVLSPSH 1058

  Fly   199 VRAIPTS---------GQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTAR---IGDGPIL 251
            .|  |.:         |.:.|..|..|.|.|:..|.|||:|.| ::.|...|:.|   ..||. |
Mouse  1059 PR--PATRLRLDRTQPGVVDASPGQRIRLTCRAEGFPVPTIEW-QRDGQLVSSPRHQVQPDGS-L 1119

  Fly   252 TLEKLERQQAGVYQCTADNGVG-DPVTVDMRLDVL-------YPPDIQVEKSWIHSGEGFEAKLV 308
            .:.:::.:..|.|.|.|.||.. |...|.:|  ||       .||.:.|       .||..|:|:
Mouse  1120 VISRVDVEDGGYYSCVAFNGQDRDQRWVQLR--VLRELTITGLPPAVTV-------AEGDTARLL 1175

  Fly   309 CIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHM-----LTIRHIQQEDFGNYSCVA---DNS 365
            |:|..:.| .:.|.:|..|||:...|:       |.     |.|.:::..|.|:|:|.|   ..:
Mouse  1176 CVVAGESV-NIRWSRNGLPIQADGHRV-------HQSPDGTLLIHNLRPRDEGSYTCSAFRGSQA 1232

  Fly   366 LGRSRKYMELSGRPGA 381
            :.||.:.......|.|
Mouse  1233 VSRSTEVKVALPAPAA 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 4/12 (33%)
IG_like 109..195 CDD:214653 21/125 (17%)
Ig 118..191 CDD:143165 19/102 (19%)
IG_like 205..274 CDD:214653 24/81 (30%)
IGc2 213..273 CDD:197706 22/62 (35%)
IGc2 301..367 CDD:197706 21/73 (29%)
FN3 392..486 CDD:238020
PaplnNP_001192272.1 TSP1 30..81 CDD:214559
ADAM_spacer1 184..299 CDD:368694
TSP1 309..362 CDD:214559
TSP1 389..447 CDD:214559
TSP1 447..504 CDD:214559
TSP1 511..562 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..648
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 694..737
Kunitz_BPTI 771..822 CDD:333766
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..924
Papilin_u7 831..922 CDD:374683
Ig 932..>995 CDD:386229 16/65 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1024..1064 7/41 (17%)
I-set 1070..1141 CDD:369462 24/72 (33%)
Ig 1157..1241 CDD:386229 26/98 (27%)
PLAC 1257..1289 CDD:370061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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