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Protein Alignment klg and Cntn5

DIOPT Version :10

Sequence 1:	NP_524454.2	Gene:	klg / 42707	FlyBaseID:	FBgn0017590	Length:	545	Species:	Drosophila melanogaster
Sequence 2:	NP_446198.1	Gene:	Cntn5 / 114589	RGDID:	621302	Length:	1099	Species:	Rattus norvegicus

Alignment Length:	358	Identity:	96/358 - (26%)
Similarity:	139/358 - (38%)	Gaps:	63/358 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    73 ISNRGSNSRSMSNVQQSAVAASTLTATLPR-------FLSR--GHTYRAV---VGDTLVLPCQ-V 124
            |.|..|.||.....|  .:|.:|..:.|.|       :|..  |.|..||   .|..:||.|. .
  Rat   158 IINNPSESRDSGLYQ--CLATNTFGSILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPP 220

  Fly   125 ENLGNFVLLWRRGTNVLTASNIMVTRDERVRLI--DGYNLEISDLEPQDAGDYVCQISDKINRDQ 187
            .:....:..|     |.......|..|.| |.|  :..||.||.::..|.|.|:|.:     ::.
  Rat   221 PHSPEIIYSW-----VFNEFPSFVAEDSR-RFISQETGNLYISKVQTSDVGSYICLV-----KNA 274

  Fly   188 VHTVEILVPPSVRAIPTSG---------------QLQARKGGPITLECKGSGNPVPSIYWTKKSG 237
            |....:|.||:...:...|               .:.|.||..:.:||...|||||:|.|.|.:|
  Rat   275 VTNARVLSPPTPLTLRNDGVMGEYEPKIEVHFPTTVTAAKGTTVKMECFALGNPVPTITWMKVNG 339

  Fly   238 ANKSTARIGDG-PILTLEKLERQQAGVYQCTADNGVGDPVTVDMRLDVLYPPDIQ-VEKSWIHSG 300
            ...|.:|:... .:|.:..|:...||:|:|||:|..|............||..:| :..:.:.||
  Rat   340 YIPSKSRLRKSQAVLEIPNLQLDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLNDTQLDSG 404

  Fly   301 EGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIMATRANRHMLTIRHIQQEDFGNYSCVADNS 365
            ...:.:  |.....|..|..|.:|..|:....|   ...|| .:|.|..:.|.|.|.|.|:|:|.
  Rat   405 SPLQWE--CKATGKPRPTYRWLKNGAPLLPQSR---VDTAN-GVLAIHSVNQSDAGMYQCLAENK 463

  Fly   366 LGRSRKYMELSGRPGAAEFYSPKWGRSPDSYNL 398
            .|......||            |...||.|:.|
  Rat   464 YGAIYASAEL------------KILASPPSFEL 484

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.