DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and ncam2

DIOPT Version :10

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_012811963.1 Gene:ncam2 / 100151722 XenbaseID:XB-GENE-1217730 Length:865 Species:Xenopus tropicalis


Alignment Length:560 Identity:116/560 - (20%)
Similarity:213/560 - (38%) Gaps:146/560 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 STLTATLPRFLSRGHTYRAVVG--DTLVLPCQVENLGNFVLLWRRGTNVLTASNIMVTRDERVRL 156
            |.:....|..|::..::.|...  :.:.|.|:........:.|.|       :..:|..:|:..|
 Frog   231 SVIVNVPPEILAQQRSFNATADRLEDITLFCRATGSPKPYITWHR-------NGKLVEENEKYDL 288

  Fly   157 -IDGYNLEISDLEPQDAGDYVCQISDKIN-RDQVHTVEILVPPSVRAIPTSGQLQARKGGPITLE 219
             .|...|.:.::...|:|.|||:.::|.. .::...:::.|.|.:..:.....::   .|.:||.
 Frog   289 REDNTELTVKNIISTDSGLYVCRATNKAGFTEKQSFLQVFVQPHIVQLQNETTIE---HGHVTLT 350

  Fly   220 CKGSGNPVPSIYWTKKS-------------GANKSTARIGDGPILTLEKLERQQAGVYQCTADNG 271
            |:..|.|:|.|.|.:.|             |..:||...|... |.::.:....||.|.|.|.:.
 Frog   351 CEAEGEPIPEITWKRSSDGMIFYDGDKSQDGRIESTGHHGKSS-LHIKSVMLSDAGRYDCEAASR 414

  Fly   272 VGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNSFPIQSTDRRIM 336
            :|.. ...|.|::.|.|.....::..:|.|.....:.|.|.::|.:::.|        |.|:.::
 Frog   415 IGGH-QKSMYLNIEYAPKFISNQTIYYSWENNPINISCDVTSNPPSSIYW--------SRDKLLL 470

  Fly   337 ATR----------ANRHMLTIRHIQQEDFGNYSCVADNSLG-RSRKY-MELSGRPGA-------- 381
            ..|          ..|.:|.|..:...|||.|:|.|.||:| |.::| :.|:..|.:        
 Frog   471 PARNITNIKTYRDGKRILLEITPLSDNDFGRYNCTAINSIGSRIQEYILTLADVPSSPYGLRVIE 535

  Fly   382 -AEFYSPKWGRSPDS--------YNLTWKIDSYPPLEEVR-------LLYRRVQMNETYQ----- 425
             ::.|:..:...|||        |.:.:|..|....:.||       ::...:..|.||:     
 Frog   536 LSQTYAKVFFNKPDSHGGVPIHHYQMDFKEVSSEIWKVVRSHGTQTIIVLGNLDANTTYEVKVAA 600

  Fly   426 ------------------------------QPGRWHDFIL--TPEHRPASEPLTHIMSYTIKN-- 456
                                          |||....|.|  |.:....:..|.:::.|..|:  
 Frog   601 VNGKGKGEYSKTEIFQTLPVREPSPPSIHGQPGGGKSFKLSITKQDDGGAPILNYVVKYRSKDKE 665

  Fly   457 --------LHPGGY-----------YEAIVQAKNRYGWNEVSDIFQFVVATNSQDIGPEDAEVVA 502
                    |....|           ||..:.|.||.|.:|.: :|:|::        |....::|
 Frog   666 DQWLEKKFLGNKDYIILDHLQWNVGYEVHIIATNRLGHSEPT-VFEFLM--------PPKPNIIA 721

  Fly   503 SSKSRSNSASIGSLPGSTVLHTALLLALALS--NCQFDRR 540
            .  :..:...:|::.|..|  .||||.|.::  :|.|.|:
 Frog   722 D--TLFSGLGVGAVIGLAV--AALLLVLVVTDVSCFFIRQ 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 IG_like 109..195 CDD:214653 16/89 (18%)
Ig strand B 118..122 CDD:409353 1/3 (33%)
Ig strand C 131..135 CDD:409353 0/3 (0%)
Ig strand E 160..164 CDD:409353 1/3 (33%)
Ig strand F 174..179 CDD:409353 3/4 (75%)
Ig strand G 188..191 CDD:409353 0/2 (0%)
Ig_3 196..270 CDD:464046 21/86 (24%)
Ig_3 287..364 CDD:464046 19/86 (22%)
FN3 392..486 CDD:238020 31/166 (19%)
ncam2XP_012811963.1 Ig 50..142 CDD:472250
Ig strand B 67..71 CDD:409452
Ig strand C 79..83 CDD:409452
Ig strand E 105..109 CDD:409452
Ig strand F 119..124 CDD:409452
Ig strand G 133..136 CDD:409452
IG_like 150..234 CDD:214653 1/2 (50%)
Ig strand B 161..165 CDD:409353
Ig strand C 174..178 CDD:409353
Ig strand E 198..202 CDD:409353
Ig strand F 212..217 CDD:409353
Ig 238..327 CDD:472250 18/95 (19%)
Ig strand B 257..261 CDD:409301 1/3 (33%)
Ig strand C 270..274 CDD:409301 0/3 (0%)
Ig strand E 293..297 CDD:409301 1/3 (33%)
Ig strand F 307..312 CDD:409301 3/4 (75%)
Ig strand G 320..323 CDD:409301 0/2 (0%)
Ig 329..426 CDD:472250 25/101 (25%)
Ig strand B 347..351 CDD:143278 2/3 (67%)
Ig strand C 360..364 CDD:143278 1/3 (33%)
Ig strand E 392..396 CDD:143278 1/4 (25%)
Ig strand F 406..411 CDD:143278 2/4 (50%)
Ig strand G 419..422 CDD:143278 0/2 (0%)
Ig_3 430..508 CDD:464046 19/85 (22%)
FN3 525..617 CDD:238020 13/91 (14%)
fn3 623..707 CDD:394996 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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