DRSC/TRiP Functional Genomics Resources

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Protein Alignment klg and lrit3b

DIOPT Version :9

Sequence 1:NP_524454.2 Gene:klg / 42707 FlyBaseID:FBgn0017590 Length:545 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:339 Identity:68/339 - (20%)
Similarity:102/339 - (30%) Gaps:122/339 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 RSMSNVQQSAVAASTLTATLPR---FLSRGHTYRAVV----GDTLVLPCQVENL--------GNF 130
            |:::.:..|:...|||...|..   |.....|.|:.|    .:..|..|::..|        .:.
Zfish   184 RNVTYLDLSSNRLSTLANDLTALWLFSDSNQTQRSFVLGLQDNPWVCDCRLSTLLDISRGPESSL 248

  Fly   131 VLLWRRGTNVLTASNIMVTRDERVRLIDGYNLEISDLEPQDAGDYVCQISDKINRDQVHTVEILV 195
            |||.|    .||.|                       ||.|......|           :||:..
Zfish   249 VLLDR----FLTCS-----------------------EPLDLAGVPFQ-----------SVELSR 275

  Fly   196 PPSVRAIPTSGQLQARKGGPITLECKGSGNPVPSIYWTKKSGANKSTARIGDGPILTLEKLERQQ 260
            ......:.::.::.|..|..:.|.|:.:|:|.|::.|.|.:..|                |..| 
Zfish   276 CRRPYVVTSATKITALLGSTVLLRCEATGHPTPALMWIKSAKRN----------------LYNQ- 323

  Fly   261 AGVYQCTADNGVGDPVTVDMRLDVLYPPDIQVEKSWIHSGEGFEAKLVCIVFADPVATVSWYQNS 325
             |..:.|..:           ||.                |.|..||...|...|...|.|    
Zfish   324 -GCCKQTQSS-----------LDT----------------ERFPKKLFGYVQESPRVGVRW---- 356

  Fly   326 FPIQSTDRRIMATRANRHMLTIRHIQQEDFGNYSCVADNSLGRSRKYMELSGRPGAAEFYSPKWG 390
                             .::::..|...|.|.|.|.|.|..|.|...:.|:.....||:...|  
Zfish   357 -----------------SVVSLNGISYSDAGEYRCRAQNMAGISEAVVSLNVVGVMAEYTDFK-- 402

  Fly   391 RSPDSYNLTWKIDS 404
             :.|....|.|.||
Zfish   403 -NSDQQQTTTKSDS 415

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
klgNP_524454.2 DUF1370 63..>124 CDD:284518 12/49 (24%)
IG_like 109..195 CDD:214653 19/97 (20%)
Ig 118..191 CDD:143165 14/80 (18%)
IG_like 205..274 CDD:214653 14/68 (21%)
IGc2 213..273 CDD:197706 13/59 (22%)
IGc2 301..367 CDD:197706 15/65 (23%)
FN3 392..486 CDD:238020 5/13 (38%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470
leucine-rich repeat 69..89 CDD:275380
LRR_8 112..172 CDD:290566
leucine-rich repeat 114..137 CDD:275378
leucine-rich repeat 138..161 CDD:275378
LRR_8 160..214 CDD:290566 7/29 (24%)
LRR_4 160..201 CDD:289563 5/16 (31%)