DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4704 and micu1

DIOPT Version :9

Sequence 1:NP_001287476.1 Gene:CG4704 / 42706 FlyBaseID:FBgn0039029 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_005156578.1 Gene:micu1 / 561210 ZFINID:ZDB-GENE-070410-22 Length:491 Species:Danio rerio


Alignment Length:380 Identity:137/380 - (36%)
Similarity:214/380 - (56%) Gaps:44/380 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQYENRLRLHAHPTKIFRYFATIKMKNKSGKWELYMTPNDFLRSIQPGLKQPENLGLDKFQILDE 65
            |:||||:|.::.|.||||||||:|:.|:.|..|:||||.||:|||.|..|||||||||:|.:...
Zfish   119 MEYENRIRAYSTPDKIFRYFATLKIINEHGDAEVYMTPQDFVRSITPNEKQPENLGLDQFMVKRY 183

  Fly    66 HAANKWIPE---------VKDDSIFLKIEKRGLLTYSDYVLLTILLSIPERNVRISFKLFDLNGD 121
            ...:.|..|         ..:||||..:.:.||:::|||:.||.:||.|:||..|:||:||||||
Zfish   184 DGKDFWQTEKISQDREKFADEDSIFYTLGECGLISFSDYIFLTTVLSTPQRNFEIAFKMFDLNGD 248

  Fly   122 GDVTIDELDTVFMAMTQGEVSM------------------MNSHLKSHFFGHRLNKTLSIDEFLK 168
            |:|.::|.:.| .::.:.:.||                  .:|.|.::|||..|...|:|..||:
Zfish   249 GEVDLEEFEQV-QSIIRSQTSMGMRHRDRSTTGNTLKTGGCSSALTTYFFGADLKGKLTISSFLE 312

  Fly   169 FLHALHIEIHTDQFQNLLKESSSV---ISELDFAKVVLGLRKSRSER-REILKRVKKKFGQMDHG 229
            |...|..::...:|:    .:..|   |:|..|..::|.....:|.: :::.|.:|:.|... .|
Zfish   313 FQRKLQHDVLKLEFE----RNDPVDGRITEKQFGGMLLAYSGVQSRKLKQMQKNLKRMFKDA-QG 372

  Fly   230 ITLEEFLAFFRFVQDVSIMDNALAFYYFTGADISPKTMRHIAYVVTGVKLSQHLTDVIFCIFDRN 294
            ||.||...||.|:::|:.:|.||:||:..||.|...||:.:|..|..|:||.|:.||:|.:||.:
Zfish   373 ITFEEVENFFTFLKNVNDVDTALSFYHMAGASIDKATMKQVARTVAKVELSDHVCDVVFALFDCD 437

  Fly   295 NDNIIQRKEF-TDMRRQWMHPIPLRKNPKLLSKMCIVCKCTWKML--SAWNLREP 346
            .:..:..||| ..|:::.|..:   :.||.:....:| :..||..  :||:...|
Zfish   438 GNGELSNKEFIAIMKQRLMRGL---EKPKDMGFTRLV-RAMWKCAQDTAWDFAMP 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4704NP_001287476.1 EFh 113..171 CDD:298682 25/75 (33%)
EF-hand_8 259..307 CDD:290545 19/48 (40%)
micu1XP_005156578.1 PTPRCAP 29..>110 CDD:292341
EF-hand_5 236..259 CDD:289945 12/22 (55%)
EF-hand_8 401..454 CDD:290545 20/52 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586386
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425365at33208
OrthoFinder 1 1.000 - - FOG0005802
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103708
Panther 1 1.100 - - O PTHR12294
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

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