DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4704 and micu2

DIOPT Version :9

Sequence 1:NP_001287476.1 Gene:CG4704 / 42706 FlyBaseID:FBgn0039029 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_001017539.2 Gene:micu2 / 548335 ZFINID:ZDB-GENE-030131-3374 Length:419 Species:Danio rerio


Alignment Length:339 Identity:85/339 - (25%)
Similarity:148/339 - (43%) Gaps:62/339 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FRYFATIKMKNKSGKWELYMTPNDFLRSIQPGLKQPENLGLDKFQI----LDE--HAANKWIPEV 75
            |..||::..::     |.||||.|||.|:   |.:..:..|.|..:    |||  ..|:|   ..
Zfish    81 FNQFASMIYED-----EPYMTPRDFLHSV---LMEKVDHKLKKKVLTKADLDEMIKVASK---AE 134

  Fly    76 KDDSIFLKIEKRGLLTYSDYVLLTILLSIPERNVRISFKLFDLNGDGDVTIDELDTVFMAMTQG- 139
            ..:::|..|..:||::|::|:.|..:::..:....|:||:.|:  ||..|:|:::...:....| 
Zfish   135 AGNNLFRGIGDKGLISYTEYLFLLTIITKSDTGFHIAFKMLDI--DGSETVDKMEFQKLKKVNGP 197

  Fly   140 ----------EVS----MMNSHLKSHFFGHRLNKTLSIDEFLKFLHALHIEIHTDQFQNLLKESS 190
                      |:|    .:::.|:..|||...||.|...:|.:|:..|..|:...:|....|...
Zfish   198 KKELLRQGGTELSDNADEVDTTLQVFFFGKDGNKKLQYKDFCRFMEDLQAEVQEVEFTQFSKGMK 262

  Fly   191 SVISELDFAKVVLGLRKSRSERREILKRVKKKFGQMDHGITLEEFLAFFRFVQDVSIMDNALAFY 255
            ::..| |||:.:|..  :..|..|..:...:|.......||.:||..|..|.            |
Zfish   263 TMRRE-DFAEWLLHF--TNEEDNEAYQDNMRKRIPTGQSITFDEFKEFCLFT------------Y 312

  Fly   256 YFTGADISPK------------TMRHIAYVVTGVKLSQHLTDVIFCIFDRNNDNIIQRKEFTDMR 308
            :.....||.|            ..:....:.||.:||.::.|.:|.:||.:.|:.:..|||..:.
Zfish   313 HLEDFAISVKMSIEGSKPIGLAQFKRAVMIATGHELSDNVLDTVFKLFDMDGDDCLSHKEFLAVM 377

  Fly   309 RQWMHPIPLRKNPK 322
            :..:|. .||..|:
Zfish   378 KDRVHR-GLRVQPQ 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4704NP_001287476.1 EFh 113..171 CDD:298682 19/72 (26%)
EF-hand_8 259..307 CDD:290545 15/59 (25%)
micu2NP_001017539.2 EF-hand_7 171..242 CDD:290234 18/72 (25%)
EFh 171..242 CDD:298682 18/72 (25%)
EF-hand_8 331..380 CDD:290545 12/48 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425365at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.