DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13840 and Vajk1

DIOPT Version :10

Sequence 1:NP_651102.3 Gene:CG13840 / 42705 FlyBaseID:FBgn0039028 Length:466 Species:Drosophila melanogaster
Sequence 2:NP_609688.3 Gene:Vajk1 / 34809 FlyBaseID:FBgn0028938 Length:373 Species:Drosophila melanogaster


Alignment Length:359 Identity:84/359 - (23%)
Similarity:138/359 - (38%) Gaps:101/359 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 EEPRRDPSANIDFVINTANYEPNSAGYDVEPHHGEQHYESYAYRPRVQFATSLPGPSDYHFEQIS 186
            ||.:.:|.|..        .|..::....:...|..|||                  |||...:.
  Fly    33 EEKKAEPEAKA--------AEAAASEDTTKSKRGLHHYE------------------DYHHHHVP 71

  Fly   187 NYRENRQREQEVEQH-------QQQQHQEQEDITSIYARLKELQTPANPVKRQQEESLSSHHPNR 244
            ::..:.::...|.:.       ::..|...|         |.:..|.. ||..:...:..|.|  
  Fly    72 HFPVHEEKTLTVIKKVPVPVPIEKIVHVPVE---------KHIHVPVK-VKVPKPYPVIKHIP-- 124

  Fly   245 EQSQPLEQRHYQQPESRQLQ-QPHLQQHLQQKRPHALQ------YPQDQRHHQRLGVAQDQQMLY 302
            .:.:.:.:..|:.|....:: |.|:..|:...||..::      ||.:::.|..:.|        
  Fly   125 YEVKEIVKVPYEVPAPYPVEKQVHVPVHVHYDRPVPVKVHVPAPYPVEKKVHVPVKV-------- 181

  Fly   303 SHKDSQIADLPA---ITTSVHHTPESSKAVAGLPLAKHIEITKSVPITHYQKQHVPFKQNVQVQV 364
                    .:||   :...||:..|           ||:.:.|..|:.  :..|.|.|..|...|
  Fly   182 --------HVPAPYPVEKIVHYNVE-----------KHVHVDKPYPVE--KVVHYPVKVPVDKPV 225

  Fly   365 PRTVIAAIP----KPMPIKIPVAQTVAVPQMQEVKIPIERVKPVPVERPIPFVVERRV--PYRV- 422
            |..:...:|    ||:|  :||.:.|.||    |.:|.:|..||.||:|:|:.|:..|  ||.| 
  Fly   226 PHYIDKPVPHYVDKPVP--VPVIKKVPVP----VHVPYDRPVPVHVEKPVPYEVKVHVPAPYPVI 284

  Fly   423 -EKPVVSPVYYPYPVKVPVVRTV---VHKQRPHY 452
             |.||....:.|||||:||.:.|   :.|..|.|
  Fly   285 KEVPVKVEKHVPYPVKIPVEKPVHVHIEKHVPEY 318

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