DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp12-46 and UBP13

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_009486.3 Gene:UBP13 / 852212 SGDID:S000000163 Length:747 Species:Saccharomyces cerevisiae


Alignment Length:365 Identity:112/365 - (30%)
Similarity:177/365 - (48%) Gaps:82/365 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NKRPKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHIN 123
            |...|.||.|.|.|:|..|.......|.::|..|:..|::|...|:..|.||||||.|||:|.::
Yeast   382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLLNELS 446

  Fly   124 EIILAERNAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNA 188
            |.|..|                           :|..:.|:.||:|..:.:.|            
Yeast   447 EYIERE---------------------------NKKIAASDINSDSEPSKSKN------------ 472

  Fly   189 NTSVLDASGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFD 253
                                              ::.::|||.||::.:||.|:.::|:||.|.|
Yeast   473 ----------------------------------FISDLFQGTLTNQIKCLTCDNITSRDEPFLD 503

  Fly   254 LQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKY 316
            ..::|  |:.|.|...|:.:...|.|...|||.||.||..|||::.:.:|:||..|.||||||||
Yeast   504 FPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKY 568

  Fly   317 MEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGL-W 380
            .|:.|.:||:.:.:.:||.|.:.::.:..|  .:.|:|..:|:|.|.||..|||:|:.|.... |
Yeast   569 SEKQNCNIKLFNNIHYPLTLNVCSSINSKV--CQKYELAGIVVHMGGGPQHGHYVSLCKHEKFGW 631

  Fly   381 LLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGYILFYQS 420
            |||||:.|:.::..|:.:|.|.:.::    .|.|:|||::
Yeast   632 LLFDDETVEAVKEETVLEFTGESPNM----ATAYVLFYKA 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 111/362 (31%)
UBP13NP_009486.3 Peptidase_C19 141..>165 CDD:470612
Peptidase_C19G 388..666 CDD:239128 109/356 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.