DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp12-46 and UBP1

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_010161.1 Gene:UBP1 / 851435 SGDID:S000002280 Length:809 Species:Saccharomyces cerevisiae


Alignment Length:679 Identity:124/679 - (18%)
Similarity:185/679 - (27%) Gaps:326/679 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFRE--------------------------------------- 50
            ||||.||||:.|||||:|...:...|                                       
Yeast   102 GLVNDGNTCFMNSVLQSLASSRELMEFLDNNVIRTYEEIEQNEHNEEGNGQESAQDEATHKKNTR 166

  Fly    51 ----------KVLEYKAKNKRPKE--------------TLLSCLADLFYSIATQKK-----KVGS 86
                      |.|..|:.:|..:|              .|||.|...:|......|     |..|
Yeast   167 KGGKVYGKHKKKLNRKSSSKEDEEKSQEPDITFSVALRDLLSALNAKYYRDKPYFKTNSLLKAMS 231

  Fly    87 IAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATNQGGSTSAM 151
            .:|:|.|..         .|.|:||.||.        :.||||..:     |.|:.|    |..:
Yeast   232 KSPRKNILL---------GYDQEDAQEFF--------QNILAELES-----NVKSLN----TEKL 270

  Fly   152 ASSIASKS----------------------------SSTSNSNSNSNST-----TNSNGNSSNST 183
            .::..:||                            :|..:..|..|.|     |..:|.::...
Yeast   271 DTTPVAKSELPDDALVGQLNLGEVGTVYIPTEQIDPNSILHDKSIQNFTPFKLMTPLDGITAERI 335

  Fly   184 GSL---------------------NANT-SVLDASGSLTATTTP-IISG---NGTGTNGANS--- 219
            |.|                     |.|. |.|..|..|:..:.| ||.|   |......|:|   
Yeast   336 GCLQCGENGGIRYSVFSGLSLNLPNENIGSTLKLSQLLSDWSKPEIIEGVECNRCALTAAHSHLF 400

  Fly   220 ----------EPTWVHEIFQGILTSETRCLNCETVSSK----DENFFDLQ--------------- 255
                      |.:...::...:   :.|....|.|.:|    ||::..|.               
Yeast   401 GQLKEFEKKPEGSIPEKLINAV---KDRVHQIEEVLAKPVIDDEDYKKLHTANMVRKCSKSKQIL 462

  Fly   256 -------VDVDQNTSI----THCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPM---- 305
                   :.:..|.|:    |:.:| .:|::.|..........||...|.....|   |||    
Yeast   463 ISRPPPLLSIHINRSVFDPRTYMIR-KNNSKVLFKSRLNLAPWCCDINEINLDAR---LPMSKKE 523

  Fly   306 -----------------ILALHLKRFK------------------YMEQFNRHIK---------- 325
                             ...|| :||:                  |...:| |.|          
Yeast   524 KAAQQDSSEDENIGGEYYTKLH-ERFEQEFEDSEEEKEYDDAEGNYASHYN-HTKDISNYDPLNG 586

  Fly   326 -----------------------VSHRVVFPLELRLFNTSD-------DAVNPDR---------- 350
                                   :..|::...::...|..|       |.|:.|.          
Yeast   587 EVDGVTSDDEDEYIEETDALGNTIKKRIIEHSDVENENVKDNEELQEIDNVSLDEPKINVEDQLE 651

  Fly   351 ----------------------------LYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDDD- 386
                                        .|.|.:|::|.|: .|.||||:..|..|.|....|: 
Yeast   652 TSSDEEDVIPAPPINYARSFSTVPATPLTYSLRSVIVHYGT-HNYGHYIAFRKYRGCWWRISDET 715

  Fly   387 --MVDKIEASTIEDFYGLTSDIHKSSETG 413
              :||:.|..:....:.|..:.....|||
Yeast   716 VYVVDEAEVLSTPGVFMLFYEYDFDEETG 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 124/679 (18%)
UBP1NP_010161.1 Peptidase_C19 101..>293 CDD:470612 47/216 (22%)
Peptidase_C19F 102..736 CDD:239127 121/669 (18%)
Peptidase_C19 <427..>510 CDD:470612 14/83 (17%)

Return to query results.
Submit another query.