DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp12-46 and UBP15

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001185019.1 Gene:UBP15 / 838281 AraportID:AT1G17110 Length:928 Species:Arabidopsis thaliana


Alignment Length:422 Identity:107/422 - (25%)
Similarity:167/422 - (39%) Gaps:117/422 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LFPPNE--HYF----------GLVNFGNTCYSNSVLQALYFCKPFREKVLEYK-AKNKRPKETLL 67
            |||..|  .:|          ||||.||:||:|:|||:|...||....:|... :::...|:..|
plant   422 LFPYEEFLKFFQCEVFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCL 486

  Fly    68 SCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNA 132
            .|  :|...:...::..|.::..:.::.:|....:..:..|:||||||..|:..:..|.| ||..
plant   487 MC--ELEQHVMMLRESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICL-ERLG 548

  Fly   133 GPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASG 197
            |.:..:|:.                                                        
plant   549 GETKVDPRL-------------------------------------------------------- 557

  Fly   198 SLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDV-DQN 261
                                 .|.|.|..:|.|.|.|:.:||.|:..|.:.||..||.::: ...
plant   558 ---------------------QETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWV 601

  Fly   262 TSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKV 326
            .|:...|..|:..|.|..:|.::|..|..|..|:|.:.:.:.|.||.:.||||    |..|:.|:
plant   602 ESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRF----QEGRYGKI 662

  Fly   327 SHRVVFP--LELRLFNTSDDAVNPDRLYDLTAVVIHCG--SGPNRGHYISIVKS-HGLWLLFDDD 386
            :..:.||  |::..|.|....|.|  ||.|.||::|..  :....|||||.||. .|.|...||.
plant   663 NKCISFPEMLDMIPFMTRTGDVPP--LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDS 725

  Fly   387 MVDKIEASTIEDFYGLTSDIHKSSETGYILFY 418
            .:..:..:.:            .||..|:|||
plant   726 EIHPVPMTQV------------MSEGAYMLFY 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 102/401 (25%)
UBP15NP_001185019.1 zf-MYND 130..167 CDD:460312
Peptidase_C19E 441..746 CDD:239126 102/403 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.