DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and UBP23

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_568873.1 Gene:UBP23 / 835910 AraportID:AT5G57990 Length:859 Species:Arabidopsis thaliana


Alignment Length:414 Identity:101/414 - (24%)
Similarity:166/414 - (40%) Gaps:114/414 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 REIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74
            |:||:          ||.|.||||:.|||||.|.:.:|. ...|:..|..|.........|..:.
plant   103 RKIGA----------GLQNLGNTCFLNSVLQCLTYTEPL-AATLQTAAHQKYCHVAGFCALCAIQ 156

  Fly    75 YSIATQKKKVGSI-APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGN 138
            ..:.|.::..|.| |||..::.||.....|.|..|:||||::..|:..:::              
plant   157 KHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHK-------------- 207

  Fly   139 PKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATT 203
                      .::.|.:.|:||.....                                      
plant   208 ----------CSLPSGVPSESSDAYRR-------------------------------------- 224

  Fly   204 TPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCL 268
                              :.||:||.|.|.|:.:|..|...|:|.:.|.||.:|:.:..|:...|
plant   225 ------------------SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRAL 271

  Fly   269 RCFSNTETLCSDNK-FKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVF 332
            ..|:..|.|.:..| ::|:.|....:|:|::.|.|.|.:|.:|||||    :.:|..|:..:|.|
plant   272 SRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRF----EAHRSEKIDRKVDF 332

  Fly   333 --PLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVK-SHGLWLLFDDDMVDKIEAS 394
              .::::.|.:.....|  ..|.|..|::|.|...:.|||...|: |.|:|...||:.|.::...
plant   333 TSAIDMKPFVSGPHEGN--LKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEK 395

  Fly   395 TIEDFYGLTSDIHKSSETGYILFY 418
            |:            .::..|:|||
plant   396 TV------------FNQKAYMLFY 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 98/399 (25%)
UBP23NP_568873.1 Peptidase_C19E 106..408 CDD:239126 99/411 (24%)

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