DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and UBP3

DIOPT Version :9

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_568074.1 Gene:UBP3 / 830150 AraportID:AT4G39910 Length:371 Species:Arabidopsis thaliana


Alignment Length:425 Identity:213/425 - (50%)
Similarity:273/425 - (64%) Gaps:64/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR---P 62
            |||..|:||:.:| |.||..|.|||..|||||||.||||||||||.||||::|||...||.   .
plant     1 MGAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADA 64

  Fly    63 KETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIIL 127
            :|.|::||||||..|::||||.|.||||:|:.||:|:.|.|.:||.||||||||:|:|.:.:|: 
plant    65 EENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDIL- 128

  Fly   128 AERNAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSV 192
             |:.|       |||.....||         |||:....:|......:||               
plant   129 -EKEA-------KATKTEHETS---------SSSSPEKIANGLKVPQANG--------------- 161

  Fly   193 LDASGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVD 257
                   .....||:              ||||.|||||||:|||||.||||:::||.|.||.:|
plant   162 -------VVHKEPIV--------------TWVHNIFQGILTNETRCLRCETVTARDETFLDLSLD 205

  Fly   258 VDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNR 322
            ::||:|||.||:.||:||||.:::||.||.|||.|||||||::||.|.||.:|||||||:||..|
plant   206 IEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGR 270

  Fly   323 HIKVSHRVVFPLELRLFNTSDDAVNP--DRLYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDD 385
            :.|:|:||||||||:|.||    |.|  |..|.|.|||:|.|||||.|||:|:||||..||.|||
plant   271 YKKLSYRVVFPLELKLSNT----VEPYADVEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDD 331

  Fly   386 DMVDKIEASTIEDFYGLTSDIHKSSETGYILFYQS 420
            :.|:.||.|.::.|:|.:.:...:::.||||||:|
plant   332 ENVEMIEESAVQTFFGSSQEYSSNTDHGYILFYES 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 198/398 (50%)
UBP3NP_568074.1 Peptidase_C19G 24..365 CDD:239128 198/398 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 375 1.000 Domainoid score I172
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56957
Inparanoid 1 1.050 396 1.000 Inparanoid score I481
OMA 1 1.010 - - QHG54027
OrthoDB 1 1.010 - - D378361at2759
OrthoFinder 1 1.000 - - FOG0001354
OrthoInspector 1 1.000 - - otm2926
orthoMCL 1 0.900 - - OOG6_101733
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X844
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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