DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and UBP16

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_567705.1 Gene:UBP16 / 828558 AraportID:AT4G24560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:401 Identity:94/401 - (23%)
Similarity:164/401 - (40%) Gaps:106/401 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFREKVL-EYKAKNKRPKETLLSCLADLFYSIATQKKKVGSIA 88
            ||:|.||:|::|.|.|.|.|..|.....| ::.::....||...:|..:..  :...|::...::
plant   543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKL--VVKAKEEKSPLS 605

  Fly    89 PKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATNQGGSTSAMAS 153
            |...:::|:.......|..::||||||.|:::.:                              .
plant   606 PNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTM------------------------------Q 640

  Fly   154 SIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATTTPIISGNGTGTNGAN 218
            |:..|:|....:.|:....|...|                     ||                  
plant   641 SVCIKASEYDMTKSSKLEDTTLIG---------------------LT------------------ 666

  Fly   219 SEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTS-ITHCLRCFSNTETLCSDNK 282
                     |.|.|.|:.:|:.|:..|...|...||.|::|.:.| :...||.|:.||.|..:||
plant   667 ---------FGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENK 722

  Fly   283 FKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFP--LELRLFNTSDDA 345
            ::|.:|.||:.|:|::::.:.|.:|.:.||||    |..:..|::..:.||  |:|..:.:....
plant   723 YRCGSCKSYERAKKKLKITEPPNVLTIALKRF----QAGKFGKLNKLIRFPETLDLAPYVSGGSE 783

  Fly   346 VNPDRLYDLTAVVIHCG--SGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHK 408
            .:.|  |.|..|::|..  :....|||:..:::...|...||..|             :|||:.:
plant   784 KSHD--YKLYGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTV-------------VTSDVER 833

  Fly   409 SSETG-YILFY 418
            ....| |:|||
plant   834 ILTKGAYMLFY 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 94/401 (23%)
UBP16NP_567705.1 zf-MYND 74..111 CDD:460312
Peptidase_C19 541..845 CDD:470612 94/401 (23%)
Blue background indicates that the domain is not in the aligned region.

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