DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and Usp46

DIOPT Version :9

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_808229.1 Gene:Usp46 / 69727 MGIID:1916977 Length:366 Species:Mus musculus


Alignment Length:422 Identity:267/422 - (63%)
Similarity:303/422 - (71%) Gaps:67/422 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKET 65
            ||.|.|.||::||.:.||.|||||||||||||||.||||||||||:||||.||.|||:.|: ||.
Mouse    12 MGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK-KEN 75

  Fly    66 LLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAER 130
            ||:||||||:||||||||||.|.|||||:|||||.:.||||||||||||||:|:|.|.:|:..|:
Mouse    76 LLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEK 140

  Fly   131 NAGPSNGNPKATNQGGSTSAMASSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDA 195
            .....||..|                         |.|.|....:|                   
Mouse   141 KQEKQNGKLK-------------------------NGNMNEPAENN------------------- 161

  Fly   196 SGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQ 260
                                  ..|.|||||||||.||:|||||||||||||||:|.||.|||:|
Mouse   162 ----------------------KPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQ 204

  Fly   261 NTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIK 325
            |||||||||.|||||||||:.|:.|:.|||.||||||||||||||||||||||||||||.:|:.|
Mouse   205 NTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTK 269

  Fly   326 VSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDK 390
            :|:||||||||||||||.||||.||:|||.|||:||||||||||||:||||||.|||||||:|:|
Mouse   270 LSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEK 334

  Fly   391 IEASTIEDFYGLTSDIHKSSETGYILFYQSRD 422
            |:|..||:||||||||.|:||:|||||||||:
Mouse   335 IDAQAIEEFYGLTSDISKNSESGYILFYQSRE 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 248/393 (63%)
Usp46NP_808229.1 Peptidase_C19G 36..363 CDD:239128 248/393 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836668
Domainoid 1 1.000 431 1.000 Domainoid score I580
eggNOG 1 0.900 - - E1_KOG1864
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56957
Inparanoid 1 1.050 472 1.000 Inparanoid score I1492
Isobase 1 0.950 - 0 Normalized mean entropy S1113
OMA 1 1.010 - - QHG54027
OrthoDB 1 1.010 - - D378361at2759
OrthoFinder 1 1.000 - - FOG0001354
OrthoInspector 1 1.000 - - otm42909
orthoMCL 1 0.900 - - OOG6_101733
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2327
SonicParanoid 1 1.000 - - X844
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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