DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp12-46 and USP17L1

DIOPT Version :10

Sequence 1:NP_651099.1 Gene:Usp12-46 / 42702 FlyBaseID:FBgn0039025 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001243802.1 Gene:USP17L1 / 401447 HGNCID:37182 Length:530 Species:Homo sapiens


Alignment Length:399 Identity:89/399 - (22%)
Similarity:140/399 - (35%) Gaps:112/399 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GLVNFGNTCYSNSVLQALYFCKPFREKVL--EYKAKNKRPKETLLSCLADLFYSIATQKKKVGSI 87
            ||.|.|||||.|:.||.|.:..|....:|  |:....:|||..:| |......:.|..       
Human    81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCML-CTMQAHITWALH------- 137

  Fly    88 APKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATNQGGSTSAMA 152
            :|...|...:.....|....|:|.||||.|.::.:.:..|.        |:.:..:....|    
Human   138 SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLP--------GHKQVDHHCKDT---- 190

  Fly   153 SSIASKSSSTSNSNSNSNSTTNSNGNSSNSTGSLNANTSVLDASGSLTATTTPIISGNGTGTNGA 217
                                                                             
Human   191 ----------------------------------------------------------------- 190

  Fly   218 NSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNK 282
                |.:|:||.|...|:.:||:|..:|...:.:.|:.:|:....|:...|......|.|..:|.
Human   191 ----TLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENA 251

  Fly   283 FKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFP--LELRLFNTSDDA 345
            :.|..|.....|...:.:.....:|.|.||||..:    ...|::..|.:|  |:::.: .|...
Human   252 YHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDV----AGNKLAKNVQYPECLDMQPY-MSQQN 311

  Fly   346 VNPDRLYDLTAVVIHCGSGPNRGHYISIVKSHGL-WLLFDDDMVDKIEASTIEDFYGLTSDIHKS 409
            ..| .:|.|.||::|.|...:.|||.|.||:..: |...||..|.            :.|.|...
Human   312 TGP-LVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVT------------VCSIISVL 363

  Fly   410 SETGYILFY 418
            |:..|:|||
Human   364 SQQAYVLFY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp12-46NP_651099.1 Peptidase_C19G 25..419 CDD:239128 89/399 (22%)
USP17L1NP_001243802.1 Peptidase_C19E 79..373 CDD:239126 89/399 (22%)
HABP4_PAI-RBP1 <417..454 CDD:461421
Blue background indicates that the domain is not in the aligned region.

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